DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SA1 and Stag1

DIOPT Version :10

Sequence 1:NP_477268.2 Gene:SA1 / 33974 FlyBaseID:FBgn0020616 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_001420738.1 Gene:Stag1 / 20842 MGIID:1098658 Length:1283 Species:Mus musculus


Alignment Length:1210 Identity:516/1210 - (42%)
Similarity:738/1210 - (60%) Gaps:158/1210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DALNESTSDADSPTKRMTRLRARGGVRDKPPIIDDDEDDFFAPIARKRKTPATRKGPTERKERVE 89
            |:.||:|:.:|:.::                 :::.|      :..|||.....:.|:..|    
Mouse    11 DSTNETTAHSDAGSE-----------------LEETE------VKGKRKRGRPGRPPSTNK---- 48

  Fly    90 RPRKEPVDKGHHERIDS--------------EREITTDENSLYYIVRHSKNPIASIVDQWIEQYK 140
            :|||.|   |...||::              ::....|..:|:.:|:..|:.:.|:||.|||.||
Mouse    49 KPRKSP---GEKSRIEAGIRGAGRGRANGHPQQNGDGDPVTLFEVVKLGKSAMQSVVDDWIELYK 110

  Fly   141 ANRETALVALMQFFINASGCKGKISEDIQYPVDHTSIIRRMTEEFDEESGEYPLIMSGTQWRKFK 205
            .:|:.||:.|:.|||..|||:|.:..::...:.:..|||:|||||||:||:|||.|.|.||:||:
Mouse   111 QDRDIALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKFR 175

  Fly   206 NNFCDFVQTLVKQCQYSIIYDQFLMDNVISLLTGLSDSQVRAFRHTATLAAMKLMTALVDVALLV 270
            :|||:|:..|::|||||||||:::||.|||||||||||||||||||:||||||||||||:|||.:
Mouse   176 SNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL 240

  Fly   271 SNNFDNAAKQFEAERVKSRDRRASDRLDSLMTKRSELEENMDEIKSMLTYMFKSVFVHRYRDSLP 335
            |.:.||..:|:||||.|...:||::||:.|:.||.||:||.|||::|:..:||.:|||||||::.
Mouse   241 SIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIA 305

  Fly   336 DIRAICMAEIGIWMENYPQNFLDDSYLKYIGWTLHDKIGEVRLRCLQSLLPLYEKDELKGKLELF 400
            :|||||:.|||:||:.|...||:||||||:||||||:.|||||:||::|..||...||..|||||
Mouse   306 EIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLELF 370

  Fly   401 TSKFK-------------------------DRIVAMTLDKEFEVSVHAVKLVISILKIHPEILAD 440
            |::||                         ||||:||||||::|:|.|::||..||....|.|::
Mouse   371 TNRFKTLQLHLFHCLDAVLHLRDCVLPLALDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSN 435

  Fly   441 KDCEIVYELVYSSHRGVAQAAAEFLNVRLF--HLTADMEETKTKRGKVRMPNTPLVRDLVQFFIE 503
            :|||.||.||||:||.||.||.|||:.:||  | ....||...||.....||..|:|.||.||:|
Mouse   436 EDCENVYHLVYSAHRPVAVAAGEFLHKKLFSRH-DPQAEEALAKRRGRNSPNGNLIRMLVLFFLE 499

  Fly   504 SELHEHGAYLVDSFIDSN-DMVRDWECMTDLLLEEPGPNEEVLDNKQESTLIEIMVSSVKQSATG 567
            ||||||.||||||..:|: ::::||||||:||||||...||.:.::|||.|||:||.:::|:|..
Mouse   500 SELHEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEA 564

  Fly   568 EVPVGRASNRKCTLSAKELKAIQDEKAKLTEHFIVTLPSLLEKYQADSEKLANLLAVPQYFDLNL 632
            ..||||.:.:: .|:|||.|...|::.|||||||:|||.||.||.||:||:||||.:||||||.:
Mouse   565 HPPVGRGTGKR-VLTAKERKTQIDDRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEI 628

  Fly   633 YTTNRQEGNLQALLDRINQVMSMHTGREVLETCAKTLECLCAEGSATYTRCNIARSNIIESAVNK 697
            |:|.|.|.:|.|||.:|..|:..|...:|||.|:||...||:|......|.:||||.:|:..|::
Mouse   629 YSTGRMEKHLDALLKQIKFVVEKHVESDVLEACSKTYSILCSEEYTIQNRVDIARSQLIDEFVDR 693

  Fly   698 YKDAIEEWRNLIQGEETPNEDDIYNITITLKVLSILYSSHNLNPWELFKSLFQDVEEAQSKENID 762
            :..::|:   |:|..|..::|||||:..|||.|:..:::|:|..|:||.:.::.:     |..|:
Mouse   694 FNHSVED---LLQEGEEADDDDIYNVLSTLKRLTSFHNAHDLTKWDLFGNCYRLL-----KTGIE 750

  Fly   763 R-CLPNEALVYCIEACYFSISWGLQYVENECESVNVTEVVAELRNNLDTFMGACFELTRDGPTVQ 826
            . .:|.:.:|..::..::||.|.|..:.:...|   .|.:..||..:.:|:..|.:...:..| .
Mouse   751 HGAMPEQIVVQALQCSHYSILWQLVKITDGSPS---KEDLLVLRKTVKSFLAVCQQCLSNVNT-P 811

  Fly   827 IQEAAYQSICDLLIIFSDKLARSEIEHIRGLEYKSRMDEHLILDNFVQHYVF--------SLKQD 883
            ::|.|:..:||||:|||.:|.....|.::.|.:.........|.:||..:||        |::.|
Mouse   812 VKEQAFMLLCDLLMIFSHQLMTGGREGLQPLVFNPDTGLQSELLSFVMDHVFIDQDEENQSMEGD 876

  Fly   884 VAQDETRIEELHKKRNFLACYCKLVVYNIIPTMRAASIFKYYVKCYNDYGDIIKATLGKAREINK 948
            ...:..:||.|||:||.||.:.||::|:|:....||.|||:|:|.|||||||||.||.|.|:|:|
Mouse   877 EEDEANKIEALHKRRNLLAAFSKLIIYDIVDMHAAADIFKHYMKYYNDYGDIIKETLSKTRQIDK 941

  Fly   949 VNFAMTLLLSLITVFKSL-QEQSEDGIVSKSSQEFVDLKELAKRFALTFGFDAIKNRESVAAIHR 1012
            :..|.||:|||..:|..| |||..:  :.::|.....:||||:|||||||.|.||.||:||.:|:
Mouse   942 IQCAKTLILSLQQLFNELVQEQGPN--LDRTSAHVSGIKELARRFALTFGLDQIKTREAVATLHK 1004

  Fly  1013 GGIYFA----ANKEPDDPVRAPTRLLFLEVLNEFNYKLLKQDKKVIMSFLDKIIPPAMPSSRAEE 1073
            .||.||    ..|..:.|   |..|.|||||:||:.|||:||||.:.|:|:|.:...|...|.:.
Mouse  1005 DGIEFAFKYQNQKGQEYP---PPNLAFLEVLSEFSSKLLRQDKKTVHSYLEKFLTEQMMERREDV 1066

  Fly  1074 WQPLILYRNSLL-HGETDQAPV-----ASKRAYTR---------KRRDHDEE------------- 1110
            |.|||.|||||: .||.|:..|     :||.:..|         ::|..||.             
Mouse  1067 WLPLISYRNSLVTGGEDDRMSVNSGSSSSKTSSVRSKKGRPPLHRKRVEDESLDNTWLNRTDTMI 1131

  Fly  1111 ------------------------EEEEEDEEEH-NDPDY 1125
                                    |:.:|.|.|| ::||:
Mouse  1132 QTPGPLPTPQLTSTVLRENSRPMGEQIQEPESEHGSEPDF 1171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SA1NP_477268.2 IRR1 66..>426 CDD:227824 197/398 (49%)
STAG 190..303 CDD:462502 74/112 (66%)
Stag1NP_001420738.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..59 16/77 (21%)
IRR1 12..>376 CDD:227824 188/393 (48%)
STAG 160..273 CDD:462502 74/112 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1080..1173 17/92 (18%)

Return to query results.
Submit another query.