DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SA and STAG1

DIOPT Version :9

Sequence 1:NP_477268.2 Gene:SA / 33974 FlyBaseID:FBgn0020616 Length:1127 Species:Drosophila melanogaster
Sequence 2:NP_005853.2 Gene:STAG1 / 10274 HGNCID:11354 Length:1258 Species:Homo sapiens


Alignment Length:1186 Identity:521/1186 - (43%)
Similarity:736/1186 - (62%) Gaps:135/1186 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DALNESTSDADSPTK------RMTRLRARGGVRDKPPIIDDDEDDFFAPIARKRKTPATRKGPTE 83
            |:.||:|:.:|:.::      :..|.|.|.|   :||              ...|.|  ||.|.|
Human    11 DSTNETTAHSDAGSELEETEVKGKRKRGRPG---RPP--------------STNKKP--RKSPGE 56

  Fly    84 RKERVE---------RPRKEPVDKGHHERIDSEREITTDENSLYYIVRHSKNPIASIVDQWIEQY 139
             |.|:|         |....|...|..|.:           :|:.:|:..|:.:.|:||.|||.|
Human    57 -KSRIEAGIRGAGRGRANGHPQQNGEGEPV-----------TLFEVVKLGKSAMQSVVDDWIESY 109

  Fly   140 KANRETALVALMQFFINASGCKGKISEDIQYPVDHTSIIRRMTEEFDEESGEYPLIMSGTQWRKF 204
            |.:|:.||:.|:.|||..|||:|.:..::...:.:..|||:|||||||:||:|||.|.|.||:||
Human   110 KQDRDIALLDLINFFIQCSGCRGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPQWKKF 174

  Fly   205 KNNFCDFVQTLVKQCQYSIIYDQFLMDNVISLLTGLSDSQVRAFRHTATLAAMKLMTALVDVALL 269
            ::|||:|:..|::|||||||||:::||.|||||||||||||||||||:||||||||||||:|||.
Human   175 RSNFCEFIGVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALN 239

  Fly   270 VSNNFDNAAKQFEAERVKSRDRRASDRLDSLMTKRSELEENMDEIKSMLTYMFKSVFVHRYRDSL 334
            :|.:.||..:|:||||.|...:||::||:.|:.||.||:||.|||::|:..:||.:|||||||::
Human   240 LSIHQDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAI 304

  Fly   335 PDIRAICMAEIGIWMENYPQNFLDDSYLKYIGWTLHDKIGEVRLRCLQSLLPLYEKDELKGKLEL 399
            .:|||||:.|||:||:.|...||:||||||:||||||:.|||||:||::|..||...||..||||
Human   305 AEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLEL 369

  Fly   400 FTSKFKDRIVAMTLDKEFEVSVHAVKLVISILKIHPEILADKDCEIVYELVYSSHRGVAQAAAEF 464
            ||::||||||:||||||::|:|.|::||..||....|.|:::|||.||.||||:||.||.||.||
Human   370 FTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVAVAAGEF 434

  Fly   465 LNVRLF--HLTADMEETKTKRGKVRMPNTPLVRDLVQFFIESELHEHGAYLVDSFIDSN-DMVRD 526
            |:.:||  | ....||...||.....||..|:|.||.||:|||||||.||||||..:|: ::::|
Human   435 LHKKLFSRH-DPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAAYLVDSLWESSQELLKD 498

  Fly   527 WECMTDLLLEEPGPNEEVLDNKQESTLIEIMVSSVKQSATGEVPVGRASNRKCTLSAKELKAIQD 591
            |||||:||||||...||.:.::|||.|||:||.:::|:|....||||.:.:: .|:|||.|...|
Human   499 WECMTELLLEEPVQGEEAMSDRQESALIELMVCTIRQAAEAHPPVGRGTGKR-VLTAKERKTQID 562

  Fly   592 EKAKLTEHFIVTLPSLLEKYQADSEKLANLLAVPQYFDLNLYTTNRQEGNLQALLDRINQVMSMH 656
            ::.|||||||:|||.||.||.||:||:||||.:||||||.:|:|.|.|.:|.|||.:|..|:..|
Human   563 DRNKLTEHFIITLPMLLSKYSADAEKVANLLQIPQYFDLEIYSTGRMEKHLDALLKQIKFVVEKH 627

  Fly   657 TGREVLETCAKTLECLCAEGSATYTRCNIARSNIIESAVNKYKDAIEEWRNLIQGEETPNEDDIY 721
            ...:|||.|:||...||:|......|.:||||.:|:..|:::..::|:   |:|..|..::||||
Human   628 VESDVLEACSKTYSILCSEEYTIQNRVDIARSQLIDEFVDRFNHSVED---LLQEGEEADDDDIY 689

  Fly   722 NITITLKVLSILYSSHNLNPWELFKSLFQDVEEAQSKENIDR-CLPNEALVYCIEACYFSISWGL 785
            |:..|||.|:..:::|:|..|:||.:.::.:     |..|:. .:|.:.:|..::..::||.|.|
Human   690 NVLSTLKRLTSFHNAHDLTKWDLFGNCYRLL-----KTGIEHGAMPEQIVVQALQCSHYSILWQL 749

  Fly   786 QYVENECESVNVTEVVAELRNNLDTFMGACFELTRDGPTVQIQEAAYQSICDLLIIFSDKLARSE 850
            ..:.:...|   .|.:..||..:.:|:..|.:...:..| .::|.|:..:||||:|||.:|....
Human   750 VKITDGSPS---KEDLLVLRKTVKSFLAVCQQCLSNVNT-PVKEQAFMLLCDLLMIFSHQLMTGG 810

  Fly   851 IEHIRGLEYKSRMDEHLILDNFVQHYVF--------SLKQDVAQDETRIEELHKKRNFLACYCKL 907
            .|.::.|.:.........|.:||..:||        |::.|...:..:||.|||:||.||.:.||
Human   811 REGLQPLVFNPDTGLQSELLSFVMDHVFIDQDEENQSMEGDEEDEANKIEALHKRRNLLAAFSKL 875

  Fly   908 VVYNIIPTMRAASIFKYYVKCYNDYGDIIKATLGKAREINKVNFAMTLLLSLITVFKSL-QEQSE 971
            ::|:|:....||.|||:|:|.|||||||||.||.|.|:|:|:..|.||:|||..:|..| |||..
Human   876 IIYDIVDMHAAADIFKHYMKYYNDYGDIIKETLSKTRQIDKIQCAKTLILSLQQLFNELVQEQGP 940

  Fly   972 DGIVSKSSQEFVDLKELAKRFALTFGFDAIKNRESVAAIHRGGIYFA----ANKEPDDPVRAPTR 1032
            :  :.::|.....:||||:|||||||.|.||.||:||.:|:.||.||    ..|..:.|   |..
Human   941 N--LDRTSAHVSGIKELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNQKGQEYP---PPN 1000

  Fly  1033 LLFLEVLNEFNYKLLKQDKKVIMSFLDKIIPPAMPSSRAEEWQPLILYRNSLL-HGETDQAPV-- 1094
            |.|||||:||:.|||:||||.:.|:|:|.:...|...|.:.|.|||.|||||: .||.|:..|  
Human  1001 LAFLEVLSEFSSKLLRQDKKTVHSYLEKFLTEQMMERREDVWLPLISYRNSLVTGGEDDRMSVNS 1065

  Fly  1095 ---ASKRAYTR---------KRRDHDEE------------------------------------- 1110
               :||.:..|         |:|..||.                                     
Human  1066 GSSSSKTSSVRNKKGRPPLHKKRVEDESLDNTWLNRTDTMIQTPGPLPAPQLTSTVLRENSRPMG 1130

  Fly  1111 EEEEEDEEEH-NDPDY 1125
            ::.:|.|.|| ::||:
Human  1131 DQIQEPESEHGSEPDF 1146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SANP_477268.2 STAG 190..298 CDD:285686 72/107 (67%)
STAG1NP_005853.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..84 23/92 (25%)
RFX5_DNA_bdg 3..>83 CDD:405326 23/91 (25%)
STAG 160..268 CDD:400698 72/107 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1055..1096 11/40 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1129..1148 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159462
Domainoid 1 1.000 678 1.000 Domainoid score I139
eggNOG 1 0.900 - - E1_COG5537
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21191
Inparanoid 1 1.050 904 1.000 Inparanoid score I377
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60131
OrthoDB 1 1.010 - - D167826at2759
OrthoFinder 1 1.000 - - FOG0000572
OrthoInspector 1 1.000 - - otm41283
orthoMCL 1 0.900 - - OOG6_101510
Panther 1 1.100 - - O PTHR11199
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X570
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.770

Return to query results.
Submit another query.