DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SA and stag2

DIOPT Version :9

Sequence 1:NP_477268.2 Gene:SA / 33974 FlyBaseID:FBgn0020616 Length:1127 Species:Drosophila melanogaster
Sequence 2:XP_002931833.2 Gene:stag2 / 100379784 XenbaseID:XB-GENE-998552 Length:1275 Species:Xenopus tropicalis


Alignment Length:1101 Identity:502/1101 - (45%)
Similarity:710/1101 - (64%) Gaps:59/1101 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DDDEDDFFAPIARKRKTPATRKGPTER-KERVERPRKEPVDKGHHERIDSEREITTDENSLYYIV 121
            |.|.||....|. |.|....:||.||: |..:.||.......|||::...|..:      |:.:|
 Frog    43 DTDFDDIEVKIT-KGKGKKGKKGNTEKGKGGLLRPGGPNWMNGHHQQNGVENMM------LFEVV 100

  Fly   122 RHSKNPIASIVDQWIEQYKANRETALVALMQFFINASGCKGKISEDIQYPVDHTSIIRRMTEEFD 186
            :..|:.:.|:||.|||.||.|::.||:.|:.|||..|||||.:|.|:...:.::.||||||||||
 Frog   101 KMGKSAMQSVVDDWIEAYKHNKDVALLDLINFFIQCSGCKGVVSGDMFRHMQNSEIIRRMTEEFD 165

  Fly   187 EESGEYPLIMSGTQWRKFKNNFCDFVQTLVKQCQYSIIYDQFLMDNVISLLTGLSDSQVRAFRHT 251
            |:||:|||.|:|.||:|||.:||:|:..||:|||||||||:::||.|||||||||||||||||||
 Frog   166 EDSGDYPLTMAGPQWKKFKFSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHT 230

  Fly   252 ATLAAMKLMTALVDVALLVSNNFDNAAKQFEAERVKSRDRRASDRLDSLMTKRSELEENMDEIKS 316
            :||||||||||||:|||.:|.|.||..:|:||||.|...:||:|||:.|:.||.||:||.|||::
 Frog   231 STLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANDRLELLLQKRKELQENQDEIEN 295

  Fly   317 MLTYMFKSVFVHRYRDSLPDIRAICMAEIGIWMENYPQNFLDDSYLKYIGWTLHDKIGEVRLRCL 381
            |:..:||.||||||||::.:|||||:.|||:||:.|...||:||||||:|||:|||.|||||:||
 Frog   296 MMNAIFKGVFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCL 360

  Fly   382 QSLLPLYEKDELKGKLELFTSKFKDRIVAMTLDKEFEVSVHAVKLVISILKIHPEILADKDCEIV 446
            .:|..||...||..|||||||:||||||:||||||::|:|.|:||:..:|:...|:|..:|||.|
 Frog   361 TALQGLYHNRELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENV 425

  Fly   447 YELVYSSHRGVAQAAAEFLNVRLFHLTADMEETKTKRGKVRMPNTPLVRDLVQFFIESELHEHGA 511
            |.||||:||.||.||.|||..:||......|:...||.....||..||:.||.||:|||||||.|
 Frog   426 YHLVYSAHRPVAVAAGEFLYKKLFSCRDPEEDGIMKRRGRLSPNANLVKTLVFFFLESELHEHAA 490

  Fly   512 YLVDSFID-SNDMVRDWECMTDLLLEEPGPNEEVLDNKQESTLIEIMVSSVKQSATGEVPVGRAS 575
            |||||..| :.::::|||||..|||::|...||.|.::|||.|||||:.:::|:|....||||.:
 Frog   491 YLVDSMWDCATELLKDWECMNSLLLDDPLNGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGT 555

  Fly   576 NRKCTLSAKELKAIQDEKAKLTEHFIVTLPSLLEKYQADSEKLANLLAVPQYFDLNLYTTNRQEG 640
            .:: .|:|||.|:..|:|.:|||.|.|:||.||.||..|:||:.|||.:||||||.:|||.|.|.
 Frog   556 GKR-VLTAKEKKSQMDDKTRLTELFAVSLPQLLAKYSVDAEKVTNLLVLPQYFDLEIYTTGRLEK 619

  Fly   641 NLQALLDRINQVMSMHTGREVLETCAKTLECLCAEGSATYTRCNIARSNIIESAVNKYKDAIEEW 705
            :|:|||.:|..::..||..:|||.|:||...||.|....:.|.:||:|.:|:...:|:...:|::
 Frog   620 HLEALLRQIRNIVEKHTDTDVLEACSKTYHALCNEEFTIFNRVDIAKSQLIDELADKFNRLLEDF 684

  Fly   706 RNLIQGEETPNEDDIYNITITLKVLSILYSSHNLNPWELFKSLFQDVEEAQSKENIDRCLPNEAL 770
               :|.||..:|||.|.:..|||.::..:::|:|:.|:||...::.::  ...||.|  :|.:.:
 Frog   685 ---LQEEEELDEDDAYQVLSTLKRITAFHNAHDLSRWDLFSGNYKLLK--TGIENGD--MPEQIV 742

  Fly   771 VYCIEACYFSISWGLQYVENECESVNVTEVVAELRNNLDTFMGACFELTRDGPTVQIQEAAYQSI 835
            ::.::..::.|.|.|..:.   |:.:..|.:..|:..:..|...|.....:..|. ::|.|:..:
 Frog   743 IHALQCTHYVILWQLAKIS---ETGSSKEELITLKRQMRVFCQICQHYLTNVNTA-VKEQAFTIL 803

  Fly   836 CDLLIIFSDKLARSEIEHIRGLEYK--SRMDEHLILDNFVQHYVF------SLKQDVAQDE--TR 890
            ||:|:|||.::.....|.:..|.|.  |.:...|:  :|:..:||      :...|..||:  ::
 Frog   804 CDVLMIFSHQIVVGGREALEPLVYSPDSSLQSELL--SFILDHVFIDQDDDNNSSDGQQDDEASK 866

  Fly   891 IEELHKKRNFLACYCKLVVYNIIPTMRAASIFKYYVKCYNDYGDIIKATLGKAREINKVNFAMTL 955
            ||.|||:||.||.:|||:|||::.....|.:||.|::.|||||||||.|:.|.|:|:|:..|.||
 Frog   867 IEALHKRRNLLAAFCKLIVYNVVEMNTGADVFKQYMRYYNDYGDIIKETMSKTRQIDKIQCAKTL 931

  Fly   956 LLSLITVF-KSLQEQSEDGIVSKSSQEFVDLKELAKRFALTFGFDAIKNRESVAAIHRGGIYFAA 1019
            :|||..:| :.:||.|.:  ..:||..|..:||||:|||||||.|.:|.||::|.:|:.||.||.
 Frog   932 ILSLQQLFNEMIQEHSYN--FDRSSPTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEFAF 994

  Fly  1020 NKEPDDPVRA--PTRLLFLEVLNEFNYKLLKQDKKVIMSFLDKIIPPAMPSSRAEEWQPLILYRN 1082
             |||.....|  |..:.||::|:||:.|||:||||.:.::|:|.:...|...|.:.|.||:.|||
 Frog   995 -KEPSPQGEAHPPLNMAFLDILSEFSSKLLRQDKKTVYAYLEKFMTFQMSLRREDVWLPLMSYRN 1058

  Fly  1083 SLLHGETDQ------------APVASKRAY--TRKRRDHDEEEEEEED------EEEHNDP 1123
            |||.|..|.            :...||:..  |.||:..:.||....|      |:..|.|
 Frog  1059 SLLAGGDDDTMSVMSGMSGRGSSSRSKKIKPPTGKRKLPEAEESSSSDSMWLNREQTMNTP 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SANP_477268.2 STAG 190..298 CDD:285686 75/107 (70%)
stag2XP_002931833.2 STAG 169..277 CDD:400698 75/107 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 674 1.000 Domainoid score I142
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 899 1.000 Inparanoid score I379
OMA 1 1.010 - - QHG60131
OrthoDB 1 1.010 - - D167826at2759
OrthoFinder 1 1.000 - - FOG0000572
OrthoInspector 1 1.000 - - otm72282
Panther 1 1.100 - - LDO PTHR11199
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X570
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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