DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gas41 and gfl-1

DIOPT Version :9

Sequence 1:NP_609086.1 Gene:Gas41 / 33973 FlyBaseID:FBgn0031873 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_502172.1 Gene:gfl-1 / 187434 WormBaseID:WBGene00001585 Length:211 Species:Caenorhabditis elegans


Alignment Length:216 Identity:105/216 - (48%)
Similarity:140/216 - (64%) Gaps:18/216 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RLKGVTIVKPIVYGNIARSFGKKREEDGHTHQWKVYLKPYFNEDMSIYVKKVHFKLHESYANPNR 75
            |:|...|||||||||.|..||.||:.|.|||||.|:||||..||.:.:::||.||||||||.|.|
 Worm     7 RMKKKNIVKPIVYGNTATPFGYKRDSDQHTHQWTVFLKPYLIEDPTKWIRKVQFKLHESYAVPYR 71

  Fly    76 IVVKPPYEITETGWGEFEVIIKIYFNDQSERPVTCYHILKLFQSPVVDGELSSSTTMDTKKGLVS 140
            :|.|||||:|||||||||:.|:|||.|.:|:|:|.:|.|:|||..:   ||.|...:     :..
 Worm    72 VVEKPPYEVTETGWGEFEIQIRIYFVDPNEKPITAFHYLRLFQPTI---ELPSGNQI-----VCM 128

  Fly   141 ESYEEIVFQEPTQILQHYLLLSEQSANGLLTHD----TDFEEKKTKTLDNIVNVKQK-VKGEIVT 200
            |.|:||:|||||  :|.|..|  |:::|.....    .|.|:.||:|.: :..|.|| :..||..
 Worm   129 EFYDEIIFQEPT--VQMYKAL--QASDGKRPDKQAFLNDIEQVKTRTRE-LGEVAQKEIAAEIED 188

  Fly   201 LKDKLKLARETISKFKAELAK 221
            |::.||.|.:.|.|:..|||:
 Worm   189 LRESLKDAHKMIVKYNTELAE 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gas41NP_609086.1 YEATS 40..119 CDD:281374 50/78 (64%)
gfl-1NP_502172.1 YEATS 36..115 CDD:281374 50/78 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159016
Domainoid 1 1.000 120 1.000 Domainoid score I3577
eggNOG 1 0.900 - - E1_COG5033
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4760
Inparanoid 1 1.050 188 1.000 Inparanoid score I2587
Isobase 1 0.950 - 0 Normalized mean entropy S932
OMA 1 1.010 - - QHG52998
OrthoDB 1 1.010 - - D1482359at2759
OrthoFinder 1 1.000 - - FOG0003954
OrthoInspector 1 1.000 - - oto17686
orthoMCL 1 0.900 - - OOG6_102192
Panther 1 1.100 - - LDO PTHR23195
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R29
SonicParanoid 1 1.000 - - X2721
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1615.790

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