DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ihog and Neo1

DIOPT Version :9

Sequence 1:NP_609085.1 Gene:ihog / 33972 FlyBaseID:FBgn0031872 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_038938340.1 Gene:Neo1 / 81735 RGDID:619837 Length:1492 Species:Rattus norvegicus


Alignment Length:987 Identity:215/987 - (21%)
Similarity:325/987 - (32%) Gaps:292/987 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLTSS----------LLLFSLLTSRLEAIPVLEKSPAHPAHSAHPAHPAHPAHPAHPSPGVRILR 57
            |.|||          |||..||        :|...||..|.:|....|     |......||...
  Rat    11 LSTSSSRRCCPPRPLLLLLPLL--------LLLGRPASGAAAAKNGSP-----PQSAGASVRTFT 62

  Fly    58 APESLVAPL------GDEVVLECETSLQPE-RFEWSHRSSRSPGAGFKYLKTGTAKANVSQEAAI 115
            ....||.|:      |..|:|.|....:|. ..||.              |.||....||.:   
  Rat    63 PLYFLVEPVDTLSVRGSSVILNCSAYSEPSPNIEWK--------------KDGTFLNLVSDD--- 110

  Fly   116 SRLRVLV---------------RPDTLGEYRCVGWFGPL-VVTSTIARLELASTSLVDAQESESP 164
             |.::|.               :||. |.|:||.....| .:.|..|:|.:|......:|...| 
  Rat   111 -RRQLLPDGSLFISNVVHSKHNKPDE-GFYQCVATVDNLGTIVSRTAKLAVAGLPRFTSQPEPS- 172

  Fly   165 LQWRVSAGNSVLWSCGQQVQSNPSASWSYYRNGVEIKPEFIG-TNGNLFLSNVSSESSGSYSCQA 228
               .:..|||.:.:|.......|...|...|..:.:....:. .:|.|.:||.:....|.|.|..
  Rat   173 ---SIYVGNSGILNCEVNADLVPFVRWEQNRQPLLLDDRIVKLPSGTLVISNATEGDEGLYRCIV 234

  Fly   229 TNPASGERIQLPGSLQLQVTPEQRSESKSPHLLRGQPSSQEITIREGSSLLLLCPGVGSPPPTVV 293
               .||...:.....:|:|..|.........|:|  |||....|  |.|.:|.|...|.|.|.:.
  Rat   235 ---ESGGPPKFSDEAELKVLQESEEMLDLVFLMR--PSSMIKVI--GQSAVLPCVASGLPAPVIR 292

  Fly   294 W-SSPDVVGAVKNKR-SKVFGHALEISNTRVNDAGTYICFQDNGVRPALEHYIKVHVEQPPQIVR 356
            | .:.||:....:.| :.:.|.:||||:...:|||||.|..||| ...:|...::.|:.||:.::
  Rat   293 WMKNEDVLDTESSGRLALLAGGSLEISDVTEDDAGTYFCVADNG-NKTIEAQAELTVQVPPEFLK 356

  Fly   357 PPWADLTNEGDRLKLECKATGVPTPEIYWLLNGHSSIDDSEAEL--SNNFLILHSVLKRHAGYVQ 419
            .|......|...:..||:.||.|.|.:.|:.||...|.....::  .:|..:| .::|...|:.|
  Rat   357 QPANIYARESMDIVFECEVTGKPAPTVKWVKNGDVVIPSDYFKIVKEHNLQVL-GLVKSDEGFYQ 420

  Fly   420 CFARNRLGEHSAGTLLQVNPKQIQEPRESGGTHRPKPNQGSRQKQMYPPTP---PNVTR------ 475
            |.|.|.:|...||..|.:....:..|     |..|.....:....:.|.|.   |:..|      
  Rat   421 CIAENDVGNAQAGAQLIILEHDVAIP-----TLPPTSLTSATTDHLAPATTGPLPSAPRDVVASL 480

  Fly   476 LSDESVMLRWMVPRNDG-------------------------------------LP--IVIFKV- 500
            :|...:.|.|..|.:|.                                     :|  :.|||| 
  Rat   481 VSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGVARERVENTSQPGEMQVTIQNLMPATVYIFKVM 545

  Fly   501 --------------------QYRMVGKRKN--------------WQT--------TNDNIPY--- 520
                                :.::.|...|              |:|        .|..:.|   
  Rat   546 AQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITVTWETPLSGNGEIQNYKLYYMEK 610

  Fly   521 GKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALD-------- 577
            |..|.......|.:.::..||....|.||::|.     ||..         ||.:..        
  Rat   611 GTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAY-----NKHG---------PGVSTQDVAVRTLS 661

  Fly   578 --PMPVPELLEIEEYSETAVVLHWSLASDADEH-LITGYYAYYRPSSSAGEYFKATIEGAHARSF 639
              |...|:.|.:|..:..::|:||...|.|.:: .||||...||.:|...:..:..:.|... |.
  Rat   662 DVPSAAPQNLSLEVRNSKSIVIHWQPPSSATQNGQITGYKIRYRKASRKSDVTETVVTGTQL-SQ 725

  Fly   640 KIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRPKTSTTEEPTLQMGDRDTTTPSHNETFNM 704
            .|..|:..|.|.|::.:.:.....            |.|......|.:....::..|....:.::
  Rat   726 LIEGLDRGTEYNFRVAALTVNGTG------------PATDWLSAETFESDLDESRVPEVPSSLHV 778

  Fly   705 SPMLTG-------------TIGGGAVLILLLISTCFCVCRRRNSRSRGNNPNKPRMAELRDDFVP 756
            .|::|.             .:.|.|:                     |.....|....::.|:  
  Rat   779 RPLVTSIVVSWTPPENQNIVVRGYAI---------------------GYGIGSPHAQTIKVDY-- 820

  Fly   757 LGNCSPTKQRQRT-------RHIHITLN---------PLAQQQQQALEEKNDTDQ------DAPY 799
                   |||..|       .|..|||.         ||  .:........||.:      :|||
  Rat   821 -------KQRYYTIENLDPSSHYVITLKAFNNVGEGIPL--YESAVTRPHTDTSEVDLFVINAPY 876

  Fly   800 YQRPSSYDYDPT 811
            ...|     |||
  Rat   877 TPVP-----DPT 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihogNP_609085.1 IG_like 59..145 CDD:214653 25/108 (23%)
ig 265..330 CDD:278476 25/66 (38%)
IG_like 267..348 CDD:214653 28/82 (34%)
Ig 314..>377 CDD:299845 21/62 (34%)
IG_like 364..437 CDD:214653 23/74 (31%)
IGc2 365..427 CDD:197706 19/63 (30%)
FN3 467..565 CDD:238020 31/191 (16%)
fn3 580..655 CDD:278470 22/75 (29%)
Neo1XP_038938340.1 IgI_1_Neogenin_like 63..159 CDD:409387 27/114 (24%)
Ig strand B 81..85 CDD:409387 2/3 (67%)
Ig strand C 94..98 CDD:409387 1/3 (33%)
Ig strand E 118..122 CDD:409387 0/3 (0%)
Ig strand F 137..142 CDD:409387 2/4 (50%)
Ig strand G 152..155 CDD:409387 1/2 (50%)
Ig 163..250 CDD:416386 19/93 (20%)
Ig strand C 193..197 CDD:409353 0/3 (0%)
Ig strand E 215..219 CDD:409353 2/3 (67%)
Ig strand F 229..234 CDD:409353 2/4 (50%)
Ig strand G 243..246 CDD:409353 0/2 (0%)
Ig 263..348 CDD:416386 32/89 (36%)
Ig strand A 263..266 CDD:409353 2/4 (50%)
Ig strand A' 268..272 CDD:409353 1/3 (33%)
Ig strand B 275..284 CDD:409353 3/8 (38%)
Ig strand C 290..295 CDD:409353 1/4 (25%)
Ig strand C' 298..304 CDD:409353 2/5 (40%)
Ig strand D 307..312 CDD:409353 1/4 (25%)
Ig strand E 313..320 CDD:409353 4/6 (67%)
Ig strand F 327..335 CDD:409353 4/7 (57%)
Ig strand G 338..348 CDD:409353 1/9 (11%)
IgI_4_Neogenin_like 355..438 CDD:409388 24/83 (29%)
Ig strand B 369..373 CDD:409388 0/3 (0%)
Ig strand C 382..386 CDD:409388 0/3 (0%)
Ig strand E 404..408 CDD:409388 1/3 (33%)
Ig strand F 418..423 CDD:409388 2/4 (50%)
Ig strand G 431..434 CDD:409388 1/2 (50%)
FN3 470..563 CDD:238020 12/92 (13%)
FN3 570..659 CDD:238020 19/102 (19%)
FN3 667..759 CDD:238020 24/104 (23%)
FN3 770..849 CDD:214495 16/108 (15%)
FN3 887..980 CDD:238020
FN3 987..1082 CDD:238020
Neogenin_C 1189..1492 CDD:399527
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44170
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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