DRSC/TRiP Functional Genomics Resources

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Protein Alignment ihog and Neo1

DIOPT Version :10

Sequence 1:NP_609085.1 Gene:ihog / 33972 FlyBaseID:FBgn0031872 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_001406461.1 Gene:Neo1 / 81735 RGDID:619837 Length:1492 Species:Rattus norvegicus


Alignment Length:987 Identity:215/987 - (21%)
Similarity:325/987 - (32%) Gaps:292/987 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLTSS----------LLLFSLLTSRLEAIPVLEKSPAHPAHSAHPAHPAHPAHPAHPSPGVRILR 57
            |.|||          |||..||        :|...||..|.:|....|     |......||...
  Rat    11 LSTSSSRRCCPPRPLLLLLPLL--------LLLGRPASGAAAAKNGSP-----PQSAGASVRTFT 62

  Fly    58 APESLVAPL------GDEVVLECETSLQPE-RFEWSHRSSRSPGAGFKYLKTGTAKANVSQEAAI 115
            ....||.|:      |..|:|.|....:|. ..||.              |.||....||.:   
  Rat    63 PLYFLVEPVDTLSVRGSSVILNCSAYSEPSPNIEWK--------------KDGTFLNLVSDD--- 110

  Fly   116 SRLRVLV---------------RPDTLGEYRCVGWFGPL-VVTSTIARLELASTSLVDAQESESP 164
             |.::|.               :||. |.|:||.....| .:.|..|:|.:|......:|...| 
  Rat   111 -RRQLLPDGSLFISNVVHSKHNKPDE-GFYQCVATVDNLGTIVSRTAKLAVAGLPRFTSQPEPS- 172

  Fly   165 LQWRVSAGNSVLWSCGQQVQSNPSASWSYYRNGVEIKPEFIG-TNGNLFLSNVSSESSGSYSCQA 228
               .:..|||.:.:|.......|...|...|..:.:....:. .:|.|.:||.:....|.|.|..
  Rat   173 ---SIYVGNSGILNCEVNADLVPFVRWEQNRQPLLLDDRIVKLPSGTLVISNATEGDEGLYRCIV 234

  Fly   229 TNPASGERIQLPGSLQLQVTPEQRSESKSPHLLRGQPSSQEITIREGSSLLLLCPGVGSPPPTVV 293
               .||...:.....:|:|..|.........|:|  |||....|  |.|.:|.|...|.|.|.:.
  Rat   235 ---ESGGPPKFSDEAELKVLQESEEMLDLVFLMR--PSSMIKVI--GQSAVLPCVASGLPAPVIR 292

  Fly   294 W-SSPDVVGAVKNKR-SKVFGHALEISNTRVNDAGTYICFQDNGVRPALEHYIKVHVEQPPQIVR 356
            | .:.||:....:.| :.:.|.:||||:...:|||||.|..||| ...:|...::.|:.||:.::
  Rat   293 WMKNEDVLDTESSGRLALLAGGSLEISDVTEDDAGTYFCVADNG-NKTIEAQAELTVQVPPEFLK 356

  Fly   357 PPWADLTNEGDRLKLECKATGVPTPEIYWLLNGHSSIDDSEAEL--SNNFLILHSVLKRHAGYVQ 419
            .|......|...:..||:.||.|.|.:.|:.||...|.....::  .:|..:| .::|...|:.|
  Rat   357 QPANIYARESMDIVFECEVTGKPAPTVKWVKNGDVVIPSDYFKIVKEHNLQVL-GLVKSDEGFYQ 420

  Fly   420 CFARNRLGEHSAGTLLQVNPKQIQEPRESGGTHRPKPNQGSRQKQMYPPTP---PNVTR------ 475
            |.|.|.:|...||..|.:....:..|     |..|.....:....:.|.|.   |:..|      
  Rat   421 CIAENDVGNAQAGAQLIILEHDVAIP-----TLPPTSLTSATTDHLAPATTGPLPSAPRDVVASL 480

  Fly   476 LSDESVMLRWMVPRNDG-------------------------------------LP--IVIFKV- 500
            :|...:.|.|..|.:|.                                     :|  :.|||| 
  Rat   481 VSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGVARERVENTSQPGEMQVTIQNLMPATVYIFKVM 545

  Fly   501 --------------------QYRMVGKRKN--------------WQT--------TNDNIPY--- 520
                                :.::.|...|              |:|        .|..:.|   
  Rat   546 AQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAYATSPTSITVTWETPLSGNGEIQNYKLYYMEK 610

  Fly   521 GKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALD-------- 577
            |..|.......|.:.::..||....|.||::|.     ||..         ||.:..        
  Rat   611 GTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAY-----NKHG---------PGVSTQDVAVRTLS 661

  Fly   578 --PMPVPELLEIEEYSETAVVLHWSLASDADEH-LITGYYAYYRPSSSAGEYFKATIEGAHARSF 639
              |...|:.|.:|..:..::|:||...|.|.:: .||||...||.:|...:..:..:.|... |.
  Rat   662 DVPSAAPQNLSLEVRNSKSIVIHWQPPSSATQNGQITGYKIRYRKASRKSDVTETVVTGTQL-SQ 725

  Fly   640 KIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRPKTSTTEEPTLQMGDRDTTTPSHNETFNM 704
            .|..|:..|.|.|::.:.:.....            |.|......|.:....::..|....:.::
  Rat   726 LIEGLDRGTEYNFRVAALTVNGTG------------PATDWLSAETFESDLDESRVPEVPSSLHV 778

  Fly   705 SPMLTG-------------TIGGGAVLILLLISTCFCVCRRRNSRSRGNNPNKPRMAELRDDFVP 756
            .|::|.             .:.|.|:                     |.....|....::.|:  
  Rat   779 RPLVTSIVVSWTPPENQNIVVRGYAI---------------------GYGIGSPHAQTIKVDY-- 820

  Fly   757 LGNCSPTKQRQRT-------RHIHITLN---------PLAQQQQQALEEKNDTDQ------DAPY 799
                   |||..|       .|..|||.         ||  .:........||.:      :|||
  Rat   821 -------KQRYYTIENLDPSSHYVITLKAFNNVGEGIPL--YESAVTRPHTDTSEVDLFVINAPY 876

  Fly   800 YQRPSSYDYDPT 811
            ...|     |||
  Rat   877 TPVP-----DPT 883

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihogNP_609085.1 Ig 266..348 CDD:472250 29/83 (35%)
Ig strand B 278..282 CDD:409353 1/3 (33%)
Ig strand C 291..295 CDD:409353 1/4 (25%)
Ig strand E 313..317 CDD:409353 1/3 (33%)
Ig strand F 327..332 CDD:409353 3/4 (75%)
Ig strand G 341..344 CDD:409353 1/2 (50%)
Ig 352..437 CDD:472250 25/86 (29%)
Ig strand B 369..373 CDD:409353 0/3 (0%)
Ig strand C 382..386 CDD:409353 0/3 (0%)
Ig strand E 404..407 CDD:409353 0/2 (0%)
Ig strand F 417..422 CDD:409353 2/4 (50%)
Ig strand G 430..433 CDD:409353 1/2 (50%)
FN3 467..565 CDD:238020 31/191 (16%)
FN3 582..>655 CDD:238020 22/73 (30%)
Neo1NP_001406461.1 IgI_1_Neogenin_like 63..159 CDD:409387 27/114 (24%)
Ig strand A 63..66 CDD:409387 0/2 (0%)
Ig strand A' 69..75 CDD:409387 1/5 (20%)
Ig strand B 79..89 CDD:409387 3/9 (33%)
Ig strand C 93..99 CDD:409387 2/19 (11%)
Ig strand C' 101..104 CDD:409387 2/2 (100%)
Ig strand D 111..116 CDD:409387 1/4 (25%)
Ig strand E 118..124 CDD:409387 0/5 (0%)
Ig strand F 136..143 CDD:409387 4/6 (67%)
Ig strand G 148..159 CDD:409387 3/10 (30%)
Ig 163..250 CDD:472250 19/93 (20%)
Ig strand C 193..197 CDD:409353 0/3 (0%)
Ig strand E 215..219 CDD:409353 2/3 (67%)
Ig strand F 229..234 CDD:409353 2/4 (50%)
Ig strand G 243..246 CDD:409353 0/2 (0%)
Ig 263..348 CDD:472250 32/89 (36%)
Ig strand B 277..281 CDD:409353 1/3 (33%)
Ig strand C 290..294 CDD:409353 0/3 (0%)
Ig strand E 314..318 CDD:409353 1/3 (33%)
Ig strand F 328..333 CDD:409353 3/4 (75%)
Ig strand G 341..344 CDD:409353 1/2 (50%)
IgI_4_Neogenin_like 355..438 CDD:409388 24/83 (29%)
Ig strand A 355..358 CDD:409388 0/2 (0%)
Ig strand A' 360..364 CDD:409388 0/3 (0%)
Ig strand B 367..376 CDD:409388 2/8 (25%)
Ig strand C 381..387 CDD:409388 2/5 (40%)
Ig strand C' 389..392 CDD:409388 1/2 (50%)
Ig strand D 397..401 CDD:409388 0/3 (0%)
Ig strand E 405..409 CDD:409388 1/3 (33%)
Ig strand F 417..425 CDD:409388 4/7 (57%)
Ig strand G 428..438 CDD:409388 4/9 (44%)
FN3 449..955 CDD:442628 87/499 (17%)
FN3 987..1082 CDD:238020
Neogenin_C 1189..1492 CDD:461954
Blue background indicates that the domain is not in the aligned region.

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