DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ihog and ROBO2

DIOPT Version :9

Sequence 1:NP_609085.1 Gene:ihog / 33972 FlyBaseID:FBgn0031872 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_011532283.1 Gene:ROBO2 / 6092 HGNCID:10250 Length:1597 Species:Homo sapiens


Alignment Length:1062 Identity:219/1062 - (20%)
Similarity:343/1062 - (32%) Gaps:346/1062 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RILRAPESLVAPLGDEVVLECETSLQP-ERFEW---------------SHRSSRSPGAGFKYLKT 102
            ||:..|..::...|:...|.|:...:| ...||               |||.....|:.| :|:.
Human    55 RIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLF-FLRI 118

  Fly   103 GTAKANVSQEAAISRLRVLVRPDTLGEYRCV--GWFGPLVVTSTIARLELASTSLVDAQESESPL 165
            ...:.:              :||. |.|.||  .:.|..|  |..|.||:|   |:.....::|.
Human   119 VHGRRS--------------KPDE-GSYVCVARNYLGEAV--SRNASLEVA---LLRDDFRQNPT 163

  Fly   166 QWRVSAGNSVLWSCGQQVQSNPSAS--WSYYRNGVEIKPEFIG-TNGNLFLSNVSSESSGSYSCQ 227
            ...|:||...:..| |..:.:|..:  |...:..::.|.|.|. ..|.|.:||.....:|.|:|.
Human   164 DVVVAAGEPAILEC-QPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTCV 227

  Fly   228 ATNPASGERIQLPGSLQLQVTPEQRSESKSPHLLRGQPSSQEITIREGSSLLLLCPGVGSPPPTV 292
            .||.. |||...|..|.:         .:.|..|| :|.:|  .:.|..::...|...|.|.|||
Human   228 GTNMV-GERDSDPAELTV---------FERPTFLR-RPINQ--VVLEEEAVEFRCQVQGDPQPTV 279

  Fly   293 VWSSPDVVGAVKNKRSKVFGHALEISNTRVNDAGTYICFQDNGV---RPALEHYIKVHVEQPPQI 354
            .|...| ....:.:......:.|.|..|...|.|||:|..:|.|   ..:....::.....|||.
Human   280 RWKKDD-ADLPRGRYDIKDDYTLRIKKTMSTDEGTYMCIAENRVGKMEASATLTVRARPVAPPQF 343

  Fly   355 VRPPWADLTNEGDRLKLECKATGVPTPEIYWLLNGHSSI--------DDSEAELS-NNFLILHSV 410
            |..|...:..:|..:...|:..|.|.|.::|...|..::        .:|...:| ...|.:.::
Human   344 VVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTITNI 408

  Fly   411 LKRHAGYVQCFARNRLGEHSAGTLLQVN--------PKQIQEPR------------ESGGTHRPK 455
            .:..|||..|.|....|...|...|:|.        |..:|.|.            :...|..|.
Human   409 QRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPANQTLAVDGTALLKCKATGDPL 473

  Fly   456 P---------------------NQGSRQ------------------------------------- 462
            |                     .||:.|                                     
Human   474 PVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGAT 538

  Fly   463 -KQMY-------PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIP 519
             .:.|       ||:.|.||.::..||.|.|.......||...:.::........:|||..::: 
Human   539 ISKNYDLSDLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHV- 602

  Fly   520 YGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPEL 584
                       |:...:|..|:|...|.|.:.|:                 .|....||.|:.:.
Human   603 -----------KTTLYTVRGLRPNTIYLFMVRAI-----------------NPQGLSDPSPMSDP 639

  Fly   585 LEIEEYSETA----------------VVLH-------------WSLASDADEHLITGYYAYYRPS 620
            :..::.|..|                |.||             |::  |.....|.||...||.:
Human   640 VRTQDISPPAQGVDHRQVQKELGDVLVRLHNPVVLTPTTVQVTWTV--DRQPQFIQGYRVMYRQT 702

  Fly   621 S-----SAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRPKT-S 679
            |     |:.:...|.:  ...||..:..|:....||.|::.:    .:||    ||.....|| .
Human   703 SGLQATSSWQNLDAKV--PTERSAVLVNLKKGVTYEIKVRPY----FNEF----QGMDSESKTVR 757

  Fly   680 TTEE---------PTLQMGDRDTTT---------PSHNETFNMSPMLTGTIGGGAVLILLLISTC 726
            ||||         ..|.:|..::|:         |.|.         .|.|....:         
Human   758 TTEEAPSAPPQSVTVLTVGSYNSTSISVSWDPPPPDHQ---------NGIIQEYKI--------- 804

  Fly   727 FCVCRRRNSRSRGNNP----NKPRMAELRDDFVPLGNCSPTKQ------RQRTRHIHITLNP--- 778
            :|:         ||..    ||...|.:|.  |.:|...|..|      ...:..:.:...|   
Human   805 WCL---------GNETRFHINKTVDAAIRS--VIIGGLFPGIQYRVEVAASTSAGVGVKSEPQPI 858

  Fly   779 -LAQQQQQALEEKND--TDQDAPYYQRP-----------------SSYDYDPTLRRMSSSSLRRS 823
             :.::.:..:.|.|:  |:|.....::|                 |.:.|   .||.....|...
Human   859 IIGRRNEVVITENNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLY---WRRKKRKGLSNY 920

  Fly   824 QRTLERAGG---SNGSNNG-----------------------NNNNLNQSAEAGSIENPGKPGRV 862
            ..|.:|..|   ||||..|                       ||:|    :....|.|.|: |.|
Human   921 AVTFQRGDGGLMSNGSRPGLLNAGDPSYPWLADSWPATSLPVNNSN----SGPNEIGNFGR-GDV 980

  Fly   863 LMKRPRLSSRSEN-LSSGSLNS 883
            |...|....::.. ||.|::.|
Human   981 LPPVPGQGDKTATMLSDGAIYS 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihogNP_609085.1 IG_like 59..145 CDD:214653 22/103 (21%)
ig 265..330 CDD:278476 18/64 (28%)
IG_like 267..348 CDD:214653 20/83 (24%)
Ig 314..>377 CDD:299845 17/65 (26%)
IG_like 364..437 CDD:214653 18/81 (22%)
IGc2 365..427 CDD:197706 15/70 (21%)
FN3 467..565 CDD:238020 21/97 (22%)
fn3 580..655 CDD:278470 22/108 (20%)
ROBO2XP_011532283.1 Ig1_Robo 53..152 CDD:143317 27/114 (24%)
Ig 160..244 CDD:325142 25/85 (29%)
Ig 265..333 CDD:325142 18/68 (26%)
Ig4_Robo 355..444 CDD:143203 19/88 (22%)
IG 451..532 CDD:214652 7/80 (9%)
FN3 549..642 CDD:238020 25/121 (21%)
FN3 673..758 CDD:238020 22/96 (23%)
FN3 766..859 CDD:238020 19/121 (16%)
PTN13_u3 <1374..>1431 CDD:318742
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44170
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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