DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ihog and Igdcc4

DIOPT Version :10

Sequence 1:NP_609085.1 Gene:ihog / 33972 FlyBaseID:FBgn0031872 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_038937673.1 Gene:Igdcc4 / 363081 RGDID:1310919 Length:1345 Species:Rattus norvegicus


Alignment Length:859 Identity:186/859 - (21%)
Similarity:291/859 - (33%) Gaps:263/859 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLE--KSPAHPA-HSAHPAHP-------------AHPAHPAHPSPGVRILRAPESLV-------- 63
            |||  ::.|.|| |:..|..|             |.|..|..|.....:....|:.|        
  Rat    69 VLETARTLARPARHAPFPRRPWTRLEAGRSSVRGAGPQRPEAPELSGELPLPQETTVQLSCDEGP 133

  Fly    64 --APLGDE--VVLECETSL----QPERFEWS-------HRSSRS--PGAGFKYLKTGTAKANVSQ 111
              ..||.|  |||:|....    .|....||       .|.:..  |....: |.:.....:...
  Rat   134 LRVVLGPEQAVVLDCTLGAAAAGPPTTVTWSKDGDVVLERDNLHLLPNGSLR-LSSPLEPEDSDD 197

  Fly   112 EAAISRLRVLVRPDTLGEYRCVGWFGPL-VVTSTIARLELASTSLVDAQESESPLQWRVSAGNSV 175
            |.|:|..:|:.     |.|.|:. .||| ||.|.:|.::||  :|.|.  |..|....|....:.
  Rat   198 EEALSVWKVIE-----GSYSCLA-HGPLGVVASQVAVVKLA--TLEDF--SLHPESQTVEENGTA 252

  Fly   176 LWSCGQQVQSNPSASWSYYRNGVEIKPEFIG-TNGNLFLSNVSSESSGSYSCQATNPA----SGE 235
            .:.|..:....|..:|...:..|..:|..|. .||.|.:.:|....:|||.|.|||.|    |.|
  Rat   253 RFECHTEGLPAPIITWEKDQVTVTEEPRLITLPNGVLQILDVQDSDAGSYRCVATNSARQRFSQE 317

  Fly   236 ---RIQLPGSLQLQVTPEQRSESKSPHLLRGQ-----PSSQEITIREGSSLLLLCPGVGSPPPTV 292
               .:.|.|||:               ..|||     .:.:..|:..|.|::|.|.....|.|.|
  Rat   318 ALLSVALRGSLE---------------ATRGQDVVIVAAPENTTVVSGQSVVLECVASADPTPFV 367

  Fly   293 VW-------SSPDVVGAVKNKRSKVFGHA-LEISNTRVNDAGTYICFQDNGVRPALEHY----IK 345
            .|       .|.||:         |.|.. |.|::.:...:|.|:|   ...:|....:    .:
  Rat   368 SWVRQDGKPISTDVI---------VLGRTNLLIASAQPRHSGVYVC---RANKPRTRDFATAAAE 420

  Fly   346 VHVEQPPQIVRPPWADLTNEGDRLKLECKATGVPTPEIYWLLNGHSSIDDSEAEL--SNNFLILH 408
            :.|...|.|.:.|.|.........:..|:|:|.|.|.::||.:|.....:...::  ....|::.
  Rat   421 LRVLAAPAISQAPEALSRTRASTARFVCRASGEPRPTLHWLHDGAPLRPNGRVKVQGGGGSLVIT 485

  Fly   409 SVLKRHAGYVQCFARNRLGEHSAGTLLQVNPKQIQEPRESGGTHRPKPNQGSRQKQMYPPTPPNV 473
            .:..:.:||.||.|     |:||||.....|..:.                .|:.....||....
  Rat   486 QIGLQDSGYYQCVA-----ENSAGTACAAAPLAVV----------------VREGLPSAPTRVKA 529

  Fly   474 TRLSDESVMLRWMVP-----------------------------RNDGLPIVI-----------F 498
            |.||..:|::.|..|                             .||...:.:           :
  Rat   530 TPLSSSAVLVAWERPELHSEQIIGFSLHYQKARGVDNVEYQFAVNNDTTELQVRDLEPNTDYEFY 594

  Fly   499 KVQYRMVGKRK------------------------------------------NWQTTNDNIPYG 521
            .|.|..:|..:                                          |.|.....|.||
  Rat   595 VVAYSQLGASRTSSPALVHTLDDVPSAAPQLSLSSPNPSDIRVAWLPLPSSLSNGQVVKYKIEYG 659

  Fly   522 KPK----WNSEL-GKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKF-----YLQ---PG 573
            ..|    :::|: |.....::..|:|...||.||.|          .|.|.:     ::|   ||
  Rat   660 SGKEDQVFSTEVPGNETQLTLNSLQPNKVYRVRISA----------GTGAGYGVPSQWMQHRTPG 714

  Fly   574 A-ALDPMP-VPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYY------------RPSSSAG 624
            | ....:| .|..|::....|:.|| .|.......:  |:||..|:            ||....|
  Rat   715 AHNQSHVPFAPAELKVRAKMESLVV-SWQPPPHPTQ--ISGYKLYWREVGTEEEADGDRPPGGRG 776

  Fly   625 EYFKATIEG-----AHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRPKTSTTEEP 684
            :  :|...|     ...:.:::..|....:||.||.:|: .....::|:.:|:|::..|     |
  Rat   777 D--QAWDVGPVRLKKKVKQYELTQLVPGRLYEVKLVAFN-KHEDGYAAVWKGKTEKAPT-----P 833

  Fly   685 TLQMGDRDTTTPSH 698
            .|.:.......|:|
  Rat   834 DLPIQRGPPLPPAH 847

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihogNP_609085.1 Ig 266..348 CDD:472250 20/93 (22%)
Ig strand B 278..282 CDD:409353 1/3 (33%)
Ig strand C 291..295 CDD:409353 2/10 (20%)
Ig strand E 313..317 CDD:409353 1/4 (25%)
Ig strand F 327..332 CDD:409353 2/4 (50%)
Ig strand G 341..344 CDD:409353 0/6 (0%)
Ig 352..437 CDD:472250 23/86 (27%)
Ig strand B 369..373 CDD:409353 0/3 (0%)
Ig strand C 382..386 CDD:409353 0/3 (0%)
Ig strand E 404..407 CDD:409353 1/2 (50%)
Ig strand F 417..422 CDD:409353 3/4 (75%)
Ig strand G 430..433 CDD:409353 2/2 (100%)
FN3 467..565 CDD:238020 28/184 (15%)
FN3 582..>655 CDD:238020 19/89 (21%)
Igdcc4XP_038937673.1 Ig 131..223 CDD:472250 24/98 (24%)
Ig strand B 144..148 CDD:409353 3/3 (100%)
Ig strand C 160..164 CDD:409353 0/3 (0%)
Ig strand E 182..186 CDD:409353 0/4 (0%)
Ig strand F 210..215 CDD:409353 2/4 (50%)
Ig_3 237..308 CDD:464046 18/72 (25%)
IG_like 342..423 CDD:214653 20/92 (22%)
Ig strand B 353..357 CDD:409353 1/3 (33%)
Ig strand C 366..370 CDD:409353 1/3 (33%)
Ig strand E 387..391 CDD:409353 1/3 (33%)
Ig strand F 401..406 CDD:409353 2/7 (29%)
Ig 442..514 CDD:472250 20/76 (26%)
Ig strand B 444..448 CDD:409353 0/3 (0%)
Ig strand C 457..461 CDD:409353 0/3 (0%)
Ig strand E 478..484 CDD:409353 1/5 (20%)
FN3 <494..>695 CDD:442628 38/221 (17%)
Ig strand F 494..499 CDD:409353 3/4 (75%)
Ig strand G 507..510 CDD:409353 0/2 (0%)
fn3 724..818 CDD:394996 21/99 (21%)
FN3 842..934 CDD:238020 2/6 (33%)
FN3 942..1034 CDD:238020
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.