DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ihog and robo3

DIOPT Version :9

Sequence 1:NP_609085.1 Gene:ihog / 33972 FlyBaseID:FBgn0031872 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_608592.2 Gene:robo3 / 33314 FlyBaseID:FBgn0041097 Length:1342 Species:Drosophila melanogaster


Alignment Length:779 Identity:173/779 - (22%)
Similarity:265/779 - (34%) Gaps:209/779 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AHPAHPSPGVRILRAPESLVAPLGDEVVLECETSLQP-ERFEW------------SHRSSRSPGA 95
            |..:||.   ||:..|.....|..:...|.|:....| ...:|            |||.: .|..
  Fly    17 AQGSHPP---RIVEHPIDTTVPRHEPATLNCKAEGSPTPTIQWYKDGVPLKILPGSHRIT-LPAG 77

  Fly    96 GFKYLKTGTAKANVSQEAAISRLRVLVRPDTLGEYRCVGWFGPLVVTSTIARLELASTSLVDAQE 160
            |..:||...::                |....|.|.|.......|..|..|.|::|  .|.|...
  Fly    78 GLFFLKVVNSR----------------RETDAGIYWCEAKNELGVARSRNATLQVA--VLRDEFR 124

  Fly   161 SESPLQWRVSAGNSVLWSC-GQQVQSNPSASWSYYRNGVEI-----KPEFIGTNGNLFLSNVSSE 219
            .| |...|::.|::.|..| ..:....|:.:|.  :.|.::     |...|...|||.:.:....
  Fly   125 LE-PQNTRIAQGDTALLECAAPRGIPEPTVTWK--KGGQKLDLEGSKRVRIVDGGNLAIQDARQT 186

  Fly   220 SSGSYSCQATNPASGERIQLPGSLQLQVTPEQRSESKSPHLLRGQPSSQEITIREGSSLLLLCPG 284
            ..|.|.|.|.||. |.|.....:|::.|         .|:::|| |..|  |:.||:|:...|..
  Fly   187 DEGQYQCIAKNPV-GVRESSLATLKVHV---------KPYIIRG-PHDQ--TVLEGASVTFPCRV 238

  Fly   285 VGSPPPTVVWSSPDVVGAVKNKRSKVF-GHALEISNTRVNDAGTYICFQDNGVRPALEHYIKVHV 348
            .|.|.|.|:|......|.:...|..|. ..:|.:....:.|.|.|.|..|| |..|:.....:.|
  Fly   239 GGDPMPDVLWLRTASGGNMPLDRVSVLEDRSLRLERVTIADEGEYSCEADN-VVGAITAMGTLTV 302

  Fly   349 EQPPQIVRPPWADLTNEGDRLKLECKATGVPTPEIYWLLNGHSSIDDSEAELSNNFLILHSVLKR 413
            ..||:.::.|.:.....|.....||:|.|.|.|.|:|.:..:|::....|...:.|   || |..
  Fly   303 YAPPKFIQRPASKSVELGADTSFECRAIGNPKPTIFWTIKNNSTLIFPGAPPLDRF---HS-LNT 363

  Fly   414 HAGY----------------VQCFARNRLGEHSAGTLLQVNPKQIQEPR--ESGGTHRPKPNQGS 460
            ..|:                :.|.|.|.:...::...|.::.::.:.|.  .||..::..|.:..
  Fly   364 EEGHSILTLTRFQRTDKDLVILCNAMNEVASITSRVQLSLDSQEDRPPPIIISGPVNQTLPIKSL 428

  Fly   461 RQKQMYPPTPPNVTRLSDESVMLRWMVPRNDGLPI--------------VIFKVQ-------YRM 504
            ...|......|:.|        :.|.   .||:|:              :|..:.       |..
  Fly   429 ATLQCKAIGLPSPT--------ISWY---RDGIPVQPSSKLNITTSGDLIISDLDRQQDQGLYTC 482

  Fly   505 VGK----RKNWQ-------TTNDNIPY-------------GKPK------------W-------- 525
            |..    :..|.       .||.||.:             |:||            |        
  Fly   483 VASSRAGKSTWSGFLRIELPTNPNIKFYRAPEQTKCPSAPGQPKILNATASALTIVWPTSDKAGA 547

  Fly   526 NSELGKS-----------------------FTASVTDLKPQHTYRFRILA--------------- 552
            :|.||.|                       ||  |..|.....|.|.:.|               
  Fly   548 SSFLGYSVEMYCTNQSRTWIPIASRLSEPIFT--VESLTQGAAYMFIVRAENSLGFSPPSPISEP 610

  Fly   553 -----VYSNNDNKESNTSAKFYLQP-GAALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLIT 611
                 :....|..||..:::..|.. ...|....|.||||......|...|.|.:  |:.:: |.
  Fly   611 ITAGKLVGVRDGSESTGTSQLLLSDVETLLQANDVVELLEANASDSTTARLSWDI--DSGQY-IE 672

  Fly   612 GYYAYYRPSSSAGEYFKATI--EGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRT 673
            |:|.|.|...|: ||...|:  :|....|..:..|..|:.|||.|..|..:...:.|..::.||
  Fly   673 GFYLYARELHSS-EYKMVTLLNKGQGLSSCTVPGLAKASTYEFFLVPFYKSIVGKPSNSRRMRT 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihogNP_609085.1 IG_like 59..145 CDD:214653 19/98 (19%)
ig 265..330 CDD:278476 19/65 (29%)
IG_like 267..348 CDD:214653 23/81 (28%)
Ig 314..>377 CDD:299845 17/62 (27%)
IG_like 364..437 CDD:214653 20/88 (23%)
IGc2 365..427 CDD:197706 19/77 (25%)
FN3 467..565 CDD:238020 32/205 (16%)
fn3 580..655 CDD:278470 25/76 (33%)
robo3NP_608592.2 Ig 22..117 CDD:299845 24/114 (21%)
I-set 23..116 CDD:254352 23/112 (21%)
I-set 122..211 CDD:254352 23/92 (25%)
Ig 125..211 CDD:299845 23/89 (26%)
I-set 215..302 CDD:254352 27/90 (30%)
Ig 232..302 CDD:299845 18/70 (26%)
I-set 306..401 CDD:254352 21/98 (21%)
Ig 320..411 CDD:299845 20/94 (21%)
I-set 412..492 CDD:254352 13/90 (14%)
IGc2 429..489 CDD:197706 10/70 (14%)
FN3 519..612 CDD:238020 15/94 (16%)
FN3 644..735 CDD:238020 28/94 (30%)
fn3 743..832 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452288
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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