DRSC/TRiP Functional Genomics Resources

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Protein Alignment ihog and robo1

DIOPT Version :10

Sequence 1:NP_609085.1 Gene:ihog / 33972 FlyBaseID:FBgn0031872 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_068069559.2 Gene:robo1 / 30769 ZFINID:ZDB-GENE-000209-3 Length:1702 Species:Danio rerio


Alignment Length:792 Identity:183/792 - (23%)
Similarity:278/792 - (35%) Gaps:217/792 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RILRAPESLVAPLGDEVVLECETSLQP-ERFEWSHRSSR------SPGAGFKYLKTGTAKANVSQ 111
            ||:..|..|:...|:...|.|:...:| ...||.....|      :|.:....|.||        
Zfish    86 RIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSHRMLLPTG-------- 142

  Fly   112 EAAISRLRVL----VRPDTLGEYRCV--GWFGPLVVTSTIARLELASTSLVDAQESESPLQWRVS 170
              ::..||::    .:||. |.|.||  .:.|..|  |..|.||:|   ::.....::|:...|:
Zfish   143 --SLFFLRIVHGRRSKPDE-GSYVCVARNYLGEAV--SHNASLEVA---ILRDDFRQNPVDVMVA 199

  Fly   171 AGNSVLWSCGQQVQSNPSASWSYYRNGVEI--KPEFIG-TNGNLFLSNVSSESSGSYSCQATNPA 232
            ||...:..| |..:.:|..:.|:.::||.|  :.|.|. ..|.|.::|.....:|.|.|..|| .
Zfish   200 AGEPAVMEC-QPPRGHPEPTISWKKDGVNIDDRDERITIRGGKLMITNTRKTDAGKYVCVGTN-M 262

  Fly   233 SGERIQLPGSLQLQVTPEQRSESKSPHLLRGQPSSQEITIREGSSLLLLCPGVGSPPPTVVWSSP 297
            .|||    .|...::|..:|     |..|| :||||.:.:.:  |:...|...|.|.||:.|...
Zfish   263 MGER----ESEIAELTVLER-----PSFLR-KPSSQSVLVDQ--SVEFRCEAQGDPVPTIRWRKE 315

  Fly   298 DVVGAVKNKRSKVF-GHALEISNTRVNDAGTYICFQDNGV-RPALEHYIKVHVEQPPQIVRPPWA 360
            |  |.:...|.::: .|.|::......|||||.|..:|.: :......:.|||  ||..|..|..
Zfish   316 D--GELPKGRYEIWEDHTLKLKRLTSGDAGTYTCQAENMMGKTEASATLTVHV--PPVFVVRPRN 376

  Fly   361 DLTNEGDRLKLECKATGVPTPEIYWLLNGHSSI--DDSEAELSNNF-------LILHSVLKRHAG 416
            .:...|..:..:|:|||.|.|.|:|...|..::  .......|:.|       |.:.:|.:...|
Zfish   377 QVAGMGRTVTFQCEATGSPQPAIFWQKEGSQNLLFSSQPPPPSSRFSVSQTGDLTITAVERSDGG 441

  Fly   417 YVQCFARNRLGEHSAGTLLQV------NPKQI--QEPR--------------ESGGTHRPK---- 455
            |..|.|.|..|......||:|      .|..|  |.|.              ::.||..|.    
Zfish   442 YYSCQALNIAGSVITKALLEVTDVISDRPPPIVRQGPTNQTVAVDGTVVLSCQATGTPIPTILWR 506

  Fly   456 ------PNQGSRQKQ-----------------MY------------------------------- 466
                  ....||.||                 ||                               
Zfish   507 KDGVLVSTHDSRLKQLDTGALQIRYAKLGDTGMYTCTASTPSGEASWKAYLEVQEFGAPVQPGRP 571

  Fly   467 --------PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP 523
                    .|:.|:||.:|..||.|.|....|.|.....:.::........:|||..|::     
Zfish   572 TDPNLIPSAPSKPDVTDVSRTSVSLSWKPNLNAGATPTSYVIEAFSHAAGSSWQTLADHV----- 631

  Fly   524 KWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIE 588
                   |:.:..:..|||...|.|.:.|             |..|    ...||.|:.:.::.:
Zfish   632 -------KTESFVLKGLKPSAVYLFLVRA-------------ANAY----GLSDPSPISDAVKTQ 672

  Fly   589 EYSETA--------------VVLH---------------WSLASDADEHLITGYYAYYRPSSSAG 624
            :...|:              ||:|               |::  :.....|.||...||||....
Zfish   673 DVPPTSQGVEHGQIQRELGDVVIHLHNPTILSSSSVRVQWTV--EQQSQYIQGYKVMYRPSPEGA 735

  Fly   625 ------EYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRPKTSTTEE 683
                  ..|:....|.|  |..:..|:....||||::.|........|.:|.|:|.....|....
Zfish   736 PQRVDWAMFEVGAPGEH--SAVVTQLKKGITYEFKVRPFFNEFQGTDSDIKVGKTLEEAPSAAPR 798

  Fly   684 PTLQMGDRDTTT 695
            .....|..|..|
Zfish   799 GVTVTGSGDNGT 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihogNP_609085.1 Ig 266..348 CDD:472250 23/83 (28%)
Ig strand B 278..282 CDD:409353 0/3 (0%)
Ig strand C 291..295 CDD:409353 1/3 (33%)
Ig strand E 313..317 CDD:409353 2/3 (67%)
Ig strand F 327..332 CDD:409353 3/4 (75%)
Ig strand G 341..344 CDD:409353 0/2 (0%)
Ig 352..437 CDD:472250 25/93 (27%)
Ig strand B 369..373 CDD:409353 0/3 (0%)
Ig strand C 382..386 CDD:409353 1/3 (33%)
Ig strand E 404..407 CDD:409353 2/9 (22%)
Ig strand F 417..422 CDD:409353 2/4 (50%)
Ig strand G 430..433 CDD:409353 0/2 (0%)
FN3 467..565 CDD:238020 22/97 (23%)
FN3 582..>655 CDD:238020 21/107 (20%)
robo1XP_068069559.2 None

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