DRSC/TRiP Functional Genomics Resources

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Protein Alignment ihog and Robo2

DIOPT Version :10

Sequence 1:NP_609085.1 Gene:ihog / 33972 FlyBaseID:FBgn0031872 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_006523098.1 Gene:Robo2 / 268902 MGIID:1890110 Length:1598 Species:Mus musculus


Alignment Length:1050 Identity:222/1050 - (21%)
Similarity:342/1050 - (32%) Gaps:322/1050 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RILRAPESLVAPLGDEVVLECETSLQP-ERFEW---------------SHRSSRSPGAGFKYLKT 102
            ||:..|..::...|:...|.|:...:| ...||               |||.....|:.| :|:.
Mouse    55 RIVEHPSDVIVSKGEPTTLNCKAEGRPTPTIEWYKDGERVETDKDDPRSHRMLLPSGSLF-FLRI 118

  Fly   103 GTAKANVSQEAAISRLRVLVRPDTLGEYRCV--GWFGPLVVTSTIARLELASTSLVDAQESESPL 165
            ...:.:              :||. |.|.||  .:.|..|  |..|.||:|   |:.....::|.
Mouse   119 VHGRRS--------------KPDE-GSYVCVARNYLGEAV--SRNASLEVA---LLRDDFRQNPT 163

  Fly   166 QWRVSAGNSVLWSCGQQVQSNPSAS--WSYYRNGVEIKPEFIG-TNGNLFLSNVSSESSGSYSCQ 227
            ...|:||...:..| |..:.:|..:  |...:..::.|.|.|. ..|.|.:||.....:|.|:|.
Mouse   164 DVVVAAGEPAILEC-QPPRGHPEPTIYWKKDKVRIDDKEERISIRGGKLMISNTRKSDAGMYTCV 227

  Fly   228 ATNPASGERIQLPGSLQLQVTPEQRSESKSPHLLRGQPSSQEITIREGSSLLLLCPGVGSPPPTV 292
            .||.. |||...|..|.:         .:.|..|| :|.:|  .:.|..::...|...|.|.|||
Mouse   228 GTNMV-GERDSDPAELTV---------FERPTFLR-RPINQ--VVLEEEAVEFRCQVQGDPQPTV 279

  Fly   293 VWSSPDVVGAVKNKRSKVFGHALEISNTRVNDAGTYICFQDN---GVRPALEHYIKVHVEQPPQI 354
            .|...| ....:.:......:.|.|......|.|||:|..:|   .|..:....::|....|||.
Mouse   280 RWKKDD-ADLPRGRYDIKDDYTLRIKKAMSTDEGTYVCIAENRVGKVEASATLTVRVRPVAPPQF 343

  Fly   355 VRPPWADLTNEGDRLKLECKATGVPTPEIYWLLNGHSSI--------DDSEAELS-NNFLILHSV 410
            |..|...:..:|..:...|:..|.|.|.::|...|..::        .:|...:| ...|.:.::
Mouse   344 VVRPRDQIVAQGRTVTFPCETKGNPQPAVFWQKEGSQNLLFPNQPQQPNSRCSVSPTGDLTITNI 408

  Fly   411 LKRHAGYVQCFARNRLGEHSAGTLLQVN--------PKQIQEP------------RESGGTHRPK 455
            .:..|||..|.|....|...|...|:|.        |..:|.|            .:...|..|.
Mouse   409 QRSDAGYYICQALTVAGSILAKAQLEVTDVLTDRPPPIILQGPINQTLAVDGTALLKCKATGEPL 473

  Fly   456 P---------------------NQGSRQ------------------------------------- 462
            |                     :||:.|                                     
Mouse   474 PVISWLKEGFTFLGRDPRATIQDQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTESGAT 538

  Fly   463 -KQMY-------PPTPPNVTRLSDESVMLRWMVPRNDG-LPIVIFKVQYRMVGKRKNWQTTNDNI 518
             .:.|       ||:.|.||.:|..||.|.|. |...| ||...:.::........:|||..:::
Mouse   539 ISKNYDMNDLPGPPSKPQVTDVSKNSVTLSWQ-PGTPGVLPASAYIIEAFSQSVSNSWQTVANHV 602

  Fly   519 PYGKPKWNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPE 583
                        |:...:|..|:|...|.|.:.|:                 .|....||.|:.:
Mouse   603 ------------KTTLYTVRGLRPNTIYLFMVRAI-----------------NPQGLSDPSPMSD 638

  Fly   584 LLEIEEYS----------------ETAVVLH-------------WSLASDADEHLITGYYAYYRP 619
            .:..::.|                :..|.||             |::  |.....|.||...||.
Mouse   639 PVRTQDISPPAQGVDHRQVQKELGDVVVRLHNPVVLTPTTVQVTWTV--DRQPQFIQGYRVMYRQ 701

  Fly   620 SSSAGEYFKATIEGAHA-----RSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQRPKT- 678
            :|  |.......:...|     ||..:..|:....||.|::.:    .:||    ||.....|| 
Mouse   702 TS--GLQASTVWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPY----FNEF----QGMDSESKTV 756

  Fly   679 STTEEPTLQMGDRDT--TTPSHNET---FNMSPMLTGTIGGGAVLILLLISTCFCVCRRRNSRSR 738
            .||||.........|  |..|||.|   .:..|.......|     ::.....:|:         
Mouse   757 RTTEEAPSAPPQSVTVLTVGSHNSTSISVSWDPPPADHQNG-----IIQEYKIWCL--------- 807

  Fly   739 GNNP----NKPRMAELRDDFVPLGNCSPTKQ------RQRTRHIHITLNP----LAQQQQQALEE 789
            ||..    ||...|.:|.  |.:|...|..|      ...:..:.:...|    :..:.:..:.|
Mouse   808 GNETRFHINKTVDAAIRS--VVIGGLFPGIQYRVEVAASTSAGVGVKSEPQPIIIGGRNEVVITE 870

  Fly   790 KND--TDQDAPYYQRP-----------------SSYDYDPTLRRMSSSSLRRSQRTLERAGG--- 832
            .|:  |:|.....::|                 |.:.|   .||.....|.....|.:|..|   
Mouse   871 NNNSITEQITDVVKQPAFIAGIGGACWVILMGFSIWLY---WRRKKRKGLSNYAVTFQRGDGGLM 932

  Fly   833 SNGSNNG-----------------------NNNNLNQSAEAGSIENPGKPGRVLMKRPRLSSRSE 874
            ||||..|                       ||:|    :....|.|.|: |.||...|....::.
Mouse   933 SNGSRPGLLNAGDPNYPWLADSWPATSLPVNNSN----SGPNEIGNFGR-GDVLPPVPGQGDKTA 992

  Fly   875 N-LSSGSLNS 883
            . ||.|::.|
Mouse   993 TMLSDGAIYS 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihogNP_609085.1 Ig 266..348 CDD:472250 20/84 (24%)
Ig strand B 278..282 CDD:409353 0/3 (0%)
Ig strand C 291..295 CDD:409353 2/3 (67%)
Ig strand E 313..317 CDD:409353 1/3 (33%)
Ig strand F 327..332 CDD:409353 3/4 (75%)
Ig strand G 341..344 CDD:409353 0/2 (0%)
Ig 352..437 CDD:472250 22/93 (24%)
Ig strand B 369..373 CDD:409353 0/3 (0%)
Ig strand C 382..386 CDD:409353 0/3 (0%)
Ig strand E 404..407 CDD:409353 1/2 (50%)
Ig strand F 417..422 CDD:409353 2/4 (50%)
Ig strand G 430..433 CDD:409353 1/2 (50%)
FN3 467..565 CDD:238020 24/98 (24%)
FN3 582..>655 CDD:238020 20/106 (19%)
Robo2XP_006523098.1 IgC_1_Robo 54..152 CDD:409490 27/114 (24%)
Ig strand A 54..58 CDD:409490 2/2 (100%)
Ig strand A' 61..66 CDD:409490 0/4 (0%)
Ig strand B 70..78 CDD:409490 2/7 (29%)
Ig strand C 84..89 CDD:409490 2/4 (50%)
Ig strand C' 92..94 CDD:409490 0/1 (0%)
Ig strand D 105..108 CDD:409490 1/2 (50%)
Ig strand E 111..117 CDD:409490 2/6 (33%)
Ig strand F 129..137 CDD:409490 4/7 (57%)
Ig strand G 140..152 CDD:409490 6/13 (46%)
Ig 159..244 CDD:472250 25/86 (29%)
Ig strand B 173..177 CDD:409353 0/3 (0%)
Ig strand C 187..191 CDD:409353 0/3 (0%)
Ig strand E 209..213 CDD:409353 2/3 (67%)
Ig strand F 223..228 CDD:409353 2/4 (50%)
Ig strand G 237..240 CDD:409353 0/2 (0%)
Ig 251..333 CDD:472250 22/85 (26%)
Ig strand B 265..269 CDD:409353 0/3 (0%)
Ig strand C 278..282 CDD:409353 2/3 (67%)
Ig strand E 299..303 CDD:409353 1/3 (33%)
Ig strand F 313..318 CDD:409353 3/4 (75%)
Ig strand G 326..329 CDD:409353 0/2 (0%)
IgI_4_Robo 342..439 CDD:409391 22/96 (23%)
Ig strand A 342..346 CDD:409391 2/3 (67%)
Ig strand A' 348..352 CDD:409391 0/3 (0%)
Ig strand B 358..366 CDD:409391 1/7 (14%)
Ig strand C 369..376 CDD:409391 2/6 (33%)
Ig strand C' 378..381 CDD:409391 1/2 (50%)
Ig strand D 394..399 CDD:409391 0/4 (0%)
Ig strand E 401..408 CDD:409391 1/6 (17%)
Ig strand F 414..423 CDD:409391 4/8 (50%)
Ig strand G 425..436 CDD:409391 3/10 (30%)
IgI_5_Robo 446..532 CDD:409544 8/85 (9%)
Ig strand A 446..449 CDD:409544 0/2 (0%)
Ig strand A' 453..456 CDD:409544 0/2 (0%)
Ig strand B 462..469 CDD:409544 0/6 (0%)
Ig strand C 475..480 CDD:409544 0/4 (0%)
Ig strand C' 482..484 CDD:409544 0/1 (0%)
Ig strand D 491..495 CDD:409544 0/3 (0%)
Ig strand E 498..503 CDD:409544 2/4 (50%)
FN3 <510..882 CDD:442628 83/429 (19%)
Ig strand F 511..519 CDD:409544 0/7 (0%)
Ig strand G 522..532 CDD:409544 0/9 (0%)
FN3 549..642 CDD:238020 28/122 (23%)

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