DRSC/TRiP Functional Genomics Resources

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Protein Alignment ihog and pecam1

DIOPT Version :9

Sequence 1:NP_609085.1 Gene:ihog / 33972 FlyBaseID:FBgn0031872 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_031750419.1 Gene:pecam1 / 100493686 XenbaseID:XB-GENE-488102 Length:756 Species:Xenopus tropicalis


Alignment Length:620 Identity:131/620 - (21%)
Similarity:214/620 - (34%) Gaps:193/620 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LRAPESLVAPLGDEVVLECETSL---QPERFEWSHRSSRSPGAGFKYLKTGTAKANVSQEAAISR 117
            |||..|:....||.:.|.|....   :.|.||.:.:        |.:.|......|||..:..:.
 Frog    57 LRASPSVTLRNGDNLSLTCFVQFIKGETESFELTTQ--------FAFFKNFKQIYNVSSNSPNAT 113

  Fly   118 LRVL-VRPDTLGEYRCVGWFGPL-----VVTSTIA-----RLELASTSLVDAQ------------ 159
            .|:. .|..:.|:|:|....|.:     :||.|:.     :|.:::.|..:.|            
 Frog   114 YRLSPARVSSSGQYQCKVHVGQMMKQSGIVTITVTGLSKPKLSVSTNSTKEGQTIIVKCEAPEEE 178

  Fly   160 -------------------------ESESPLQWRVSAGNS---VLWSCGQQVQSNPSAS------ 190
                                     .||:|....||....   |.:.|...:.|.|:::      
 Frog   179 PPFRFTFYKMKNNGNKDMEVLGPIPTSENPASMEVSMAEGDRIVRFLCDVALTSLPNSNVSDLSD 243

  Fly   191 W-------SYYRNGVEIKPEFIGTNG-------------------NLFLSN----VSSESSGS-- 223
            |       .:....:|:.|....|.|                   .||:.|    ::|..:.:  
 Frog   244 WMLVTVEQQFSTPRIEVSPSLNFTEGKEMSVKCSIQTSSSVSGKVQLFIQNGTHILTSSKTDTVW 308

  Fly   224 YSCQATNPASGERIQLPGSLQLQVTPEQRSES-----------KSPHLLRGQPSSQEITIREGSS 277
            |:.:||...||:.|       .:...||.|:|           |||.|.....:|   |:.|.:.
 Frog   309 YAQRATESHSGQYI-------CKAEYEQTSKSNSTNVTVTELFKSPSLYSNIRNS---TMDEDAR 363

  Fly   278 LLLLCPGVGSPPPTVVWSSPDVVGAVKNKRSKVFGHALEISNTRVNDAGTYICF-------QDNG 335
            |.|.|...|..|     ||......:|:.:.:.....||| ..:.:|:|||.|.       :.:|
 Frog   364 LSLSCSVQGISP-----SSAHNFSLLKDGQIRSNSEKLEI-YAKTSDSGTYRCMVTISNITKTSG 422

  Fly   336 VRPALEHYIKVH--VEQPPQIVRPPWADLTNEGDRLKLECKATGVPTPEIYWLLNGH---SSIDD 395
            ..|     |:|:  |.:|....|.....:..:|..::|.||......|..|.|:.|.   |:|.:
 Frog   423 DLP-----IRVYAPVSKPLLSHRNQSTSMAVQGSTIELRCKCDKGTPPITYSLMKGSTVLSNITE 482

  Fly   396 SEAELSNNFLILHSVLKRHAGYVQCFARNRLGEHSAGTLLQVNPKQIQEPRESGGTHRPKPNQGS 460
            :||:.:  ...|:...::::|..:|.|.| |...|.|....||...|....|...|..|:.....
 Frog   483 TEAKAA--MFKLNISEQQNSGQYRCRAYN-LHSSSLGFSNTVNITVISPITEVTLTTIPQSGTVE 544

  Fly   461 RQKQMYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPK- 524
            ..|::              |::   ...:|..|||     .:..:.||            ||.. 
 Frog   545 EGKEL--------------SLV---CAVKNGSLPI-----DFHFLVKR------------GKESV 575

  Fly   525 WNSELGKSFTASVTDLKPQHTYRFRILAVYSNNDN 559
            .:|.:.||...|.|.:|.           :|.||:
 Frog   576 LHSSMDKSVFHSETQIKS-----------FSANDD 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ihogNP_609085.1 IG_like 59..145 CDD:214653 21/94 (22%)
ig 265..330 CDD:278476 18/64 (28%)
IG_like 267..348 CDD:214653 23/89 (26%)
Ig 314..>377 CDD:299845 19/71 (27%)
IG_like 364..437 CDD:214653 20/75 (27%)
IGc2 365..427 CDD:197706 17/64 (27%)
FN3 467..565 CDD:238020 18/94 (19%)
fn3 580..655 CDD:278470
pecam1XP_031750419.1 IG 60..147 CDD:214652 21/94 (22%)
IG_like 261..340 CDD:214653 17/85 (20%)
IG 354..422 CDD:214652 19/76 (25%)
Ig_C17orf99 450..515 CDD:407611 18/67 (27%)
IG 538..621 CDD:214652 20/107 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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