Protein Alignment Hrb27C and AT5G55550

DIOPT Version :10

• Sequence 1: NP_476869.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001331843.1
• Gene: AT5G55550 / 835649
• AraportID: AT5G55550
• Length: 507
• Species: Arabidopsis thaliana
• Alignment Length: 516
• Identity: 141/516 - (27%)
• Similarity: 215/516 - (41%)
• Gaps: 147/516 - (28%)

  Fly     3 EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
            |.:.||||:||:||:|.:|.|..||..:||:::.|:|::..:||:|||||:.||||.....|:.:
plant     2 ESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMD 66

  Fly    68 GPHTLDGRT-----------------------------------------------IDPKPCNPR 85
             .|.:||||                                               ::.|...||
plant    67 -KHIIDGRTVCDFNHFSIFQQNKQSSDLIATSSICVFESSLNLCFSKCKDQIYVLQVEAKKAVPR 130

  Fly    86 T-------------LQKPKKGGG---YKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKK 134
            .             |..|..|||   .|:|:|||||::||.:.:.:|:::|.:.:||:|||...:
plant   131 DDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQ 195

  Fly   135 KSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGS----------------GGQNS- 182
            :.|||||::|:.:.:|:.|.::.:..||||.||:|:|.|::.|                ||.|.
plant   196 RPRGFGFITFDSDDAVDRVLHKTFHELNGKLVEVKRAVPKEISPVSNIRSPLASGVNYGGGSNRM 260

  Fly   183 ------NNSTVG-GAYGKLGNECSHWGPHHAPINMMQGQNGQMG-GPPLNMPIGAPNMMPGYQGW 239
                  ||...| |.|..||..    |...:|: :..|:|.... |..||..:.. |:.|...|.
plant   261 PANSYFNNFAPGPGFYNSLGPV----GRRFSPV-IGSGRNAVSAFGLGLNHDLSL-NLNPSCDGT 319

  Fly   240 GTSPQQQQYGYGNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMY-NSTSTGAPS-- 301
            .::     :|| |..|.:....||.|.....|...:....|..:   ...|:: |.|.|..|.
plant   320 SST-----FGY-NRIPSNPYFNGASPNRYTSPIGHNRTESPYNS---NNRDLWGNRTDTAGPGWN 375

  Fly   302 -GPSGGGSWNSWNMPPNSAGPTGAPGAGAGTATDMYSRAQAWATGGPSTT------GPVGGMPRT 359
             ..|.|.:..:|.:|.:||......|.|....|          :.|.|::      |.:|.:.|.
plant   376 LNVSNGNNRGNWGLPSSSAVSNDNNGFGRNYGT----------SSGLSSSPFNGFEGSIGELYRG 430

  Fly   360 GPGNS---------ASKSGSEYDYGGYGSGYDYDYSNYVKQEGASNYGAGPRSAYGNDSST 411
            |...|         .|:|..|.|......|||.|           |.|:.|.:   ||..|
plant   431 GSVYSDSTWQQQQLPSQSSHELDNLSRAYGYDID-----------NVGSDPSA---NDPET 477

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_476869.1	RRM1_hnRNPA_hnRNPD_like	9..80	CDD:409763	32/117 (27%)
		RRM2_DAZAP1	94..173	CDD:409765	34/81 (42%)
AT5G55550	NP_001331843.1	RRM1_hnRNPA_hnRNPD_like	8..75	CDD:409763	31/67 (46%)
		ELAV_HUD_SF	19..>329	CDD:273741	90/322 (28%)
		RRM2_Hrp1p	158..235	CDD:409767	32/76 (42%)