Sequence 1: | NP_001162897.1 | Gene: | Hrb27C / 33968 | FlyBaseID: | FBgn0004838 | Length: | 421 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001276542.1 | Gene: | Celf3 / 78784 | MGIID: | 1926034 | Length: | 494 | Species: | Mus musculus |
Alignment Length: | 386 | Identity: | 86/386 - (22%) |
---|---|---|---|
Similarity: | 138/386 - (35%) | Gaps: | 88/386 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MEEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVL 65
Fly 66 QNGPH---TLDG--RTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEV 125
Fly 126 VIMYDQEKKKSRGFGFLSF----EEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNST 186
Fly 187 VGGAYGKLGNECSHWGPHHAPINMMQGQNGQMG-GPPLNMPIGAPNMMPGYQGWGTSPQQQQYGY 250
Fly 251 GNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGA------PSGPSGGGSW 309
Fly 310 NSWNMPPNSAGPTGAPGAGAGTATDMYSRAQAWATGGPSTTG--PVGGMPRTGPGNSASKS 368 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb27C | NP_001162897.1 | RRM1_DAZAP1 | 8..89 | CDD:241018 | 25/85 (29%) |
RRM2_DAZAP1 | 94..173 | CDD:240773 | 18/82 (22%) | ||
Celf3 | NP_001276542.1 | RRM1_CELF3_4_5_6 | 2..88 | CDD:410041 | 26/86 (30%) |
RRM2_CELF3_4_5_6 | 94..174 | CDD:410043 | 17/80 (21%) | ||
PRK12323 | <214..379 | CDD:237057 | 30/131 (23%) | ||
RRM3_CELF3_4_5_6 | 405..483 | CDD:241083 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |