DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb27C and HNRNPA1L3

DIOPT Version :10

Sequence 1:NP_476869.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001383170.1 Gene:HNRNPA1L3 / 642659 HGNCID:48778 Length:320 Species:Homo sapiens


Alignment Length:385 Identity:121/385 - (31%)
Similarity:173/385 - (44%) Gaps:82/385 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
            |.::..|||:||||:|||.|:|..:|.::|.:.|||||::..:.|||||||||:|....|:..:.
Human     9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73

  Fly    67 NGPHTLDGRTIDPKPCNPR-TLQKPK-----KGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEV 125
            ..||.:|||.::||....| ..|:|.     |    |:|:||:..:..|..||.:|.:|||:..:
Human    74 ARPHKVDGRVVEPKRAVSREDSQRPDAHLTVK----KIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134

  Fly   126 VIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGA 190
            .||.|:...|.|||.|::|::..||:.:..::|..:||...|::||..:......:|:.....|:
Human   135 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGS 199

  Fly   191 YGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGYGNSGP 255
             |..|.                |:.|..||   |...|......|..|:|.|  :...|||.||.
Human   200 -GNFGG----------------GRGGGFGG---NDNFGRGGNFSGRGGFGGS--RGGGGYGGSGD 242

  Fly   256 GSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSAG 320
            | |.|:|         ...||:.|......:|.|:..:|.     .||..||     |....|:|
Human   243 G-YNGFG---------NDGSNFGGGGSYNDFGNYNNQSSN-----FGPMKGG-----NFEGRSSG 287

  Fly   321 PTGAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGSEYDYGGYGSG 380
            |.|                     ||    |.....||...|...|.|.|     .||||
Human   288 PHG---------------------GG----GQYFAKPRNQGGYGGSSSSS-----SYGSG 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb27CNP_476869.1 RRM1_hnRNPA_hnRNPD_like 9..80 CDD:409763 34/70 (49%)
RRM2_DAZAP1 94..173 CDD:409765 28/78 (36%)
HNRNPA1L3NP_001383170.1 RRM1_hnRNPA1 12..92 CDD:410154 37/79 (47%)
RRM2_hnRNPA3 105..184 CDD:409996 29/82 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 182..218 9/55 (16%)
HnRNPA1 255..292 CDD:463312 13/67 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..320 23/87 (26%)

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