DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb27C and DAZ4

DIOPT Version :10

Sequence 1:NP_476869.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001375413.1 Gene:DAZ4 / 57135 HGNCID:15966 Length:723 Species:Homo sapiens


Alignment Length:561 Identity:118/561 - (21%)
Similarity:190/561 - (33%) Gaps:203/561 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHV--------- 64
            :||||:.....:..:...|.|:|.:.:..:: .|.:|.|:|:|||:|.:..:|..:         
Human    42 VFVGGIDARMDETEIGSCFGRYGSVKEVKII-TNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHG 105

  Fly    65 --LQNGP----HTLDGRTIDPKPC---------------NPRT---LQ----------------K 89
              |:.||    ..|..|.:.|:|.               ||.|   ||                .
Human   106 KKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQSAAN 170

  Fly    90 PK------------------KGGGY----------KVFLGGLPSNVTETDLRTFFNRYGKVTEVV 126
            |:                  ...|:          .||:||:.:.:.||::.:.|.|||.|.||.
Human   171 PETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVK 235

  Fly   127 IMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKA-------------------- 171
            |:.:: ...|:|:||:||..:..|:.:...: |:.:||::::..|                    
Human   236 IITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ-IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNP 298

  Fly   172 --EPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGP--PLNMPIGAPNM 232
              .|:..:..:|.|..|             :..|...|..:.|........|  |..:..|...:
Human   299 PPPPQFQNVWRNPNTET-------------YLQPQITPNPVTQHVQAYSAYPHSPGQVITGCQLL 350

  Fly   233 MPGYQGWGTSPQ---QQQYGYGNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNS 294
            :..||.:.|.|.   |...|| .....:||.:  |..|:.|         .|.|.|| ...:||.
Human   351 VYNYQEYPTYPDSAFQVTTGY-QLPVYNYQPF--PAYPRSP---------FQVTAGY-QLPVYNY 402

  Fly   295 TSTGA-PSGP---SGGGSWNSWNMPPNSAGPTGAPGAGAGTATDMYSRAQAW----------ATG 345
            .:..| |:.|   :.|..:..:|..|..|.|:......||....:|: .||:          |||
Human   403 QAFPAYPNSPFQVATGYQFPVYNYQPFPAYPSSPFQVTAGYQLPVYN-YQAFPAYPNSPFQVATG 466

  Fly   346 ----------------GP--STTG---PVGGMPRTGPGNSASKSGSEYDYGGY----------GS 379
                            .|  .|||   ||                  |:|..:          .:
Human   467 YQFPVYNYQAFPAYPNSPVQVTTGYQLPV------------------YNYQAFPAYPNSPFQVAT 513

  Fly   380 GYDYDYSNYVKQEGASNYGAGPRSAYGNDSSTQPPYATSQA 420
            ||.:...||      ..:.|.|.|.....:..|.|....||
Human   514 GYQFPVYNY------QAFPAYPNSPVQVTTGYQLPVYNYQA 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb27CNP_476869.1 RRM1_hnRNPA_hnRNPD_like 9..80 CDD:409763 21/85 (25%)
RRM2_DAZAP1 94..173 CDD:409765 26/110 (24%)
DAZ4NP_001375413.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
RRM_DAZL 35..116 CDD:410073 19/74 (26%)
PABP-1234 42..412 CDD:130689 85/398 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..192 1/28 (4%)
RRM_DAZL 200..281 CDD:410073 25/82 (30%)
Daz 407..427 CDD:465893 5/19 (26%)
Daz 431..451 CDD:465893 5/20 (25%)
Daz 455..475 CDD:465893 3/19 (16%)
Daz 479..499 CDD:465893 7/37 (19%)
Daz 503..523 CDD:465893 4/25 (16%)
Daz 527..547 CDD:465893 5/19 (26%)
Daz 551..571 CDD:465893
Daz 575..595 CDD:465893
Daz 599..619 CDD:465893
Daz 623..643 CDD:465893
Daz 647..667 CDD:465893
Daz 671..691 CDD:465893
Blue background indicates that the domain is not in the aligned region.

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