DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb27C and dazap1

DIOPT Version :9

Sequence 1:NP_001162897.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_021335308.1 Gene:dazap1 / 561459 ZFINID:ZDB-GENE-070212-1 Length:469 Species:Danio rerio


Alignment Length:465 Identity:174/465 - (37%)
Similarity:213/465 - (45%) Gaps:128/465 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNG 68
            ||.||||||||.|.||||.|..||.::|:::|||:||:..:.:|||||||.|.||..|..||...
Zfish    20 DEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTK 84

  Fly    69 PHTLDGRTIDPKPCNPRTLQKPK-------KGG------GYKVFLGGLPSNVTETDLRTFFNRYG 120
            ||.||||.||||||.||.:|..|       ||.      ..|:|:||:|.|..|.:||.:|||:|
Zfish    85 PHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFG 149

  Fly   121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNS 185
            .|||||::||.||::.|||||::||.|.||:...|..:.::.||:||:|||||||..        
Zfish   150 VVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRDSK-------- 206

  Fly   186 TVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGY--QGWGTSPQQQQY 248
              ..|.|:||  .:.|||.    .::...||....|       ||.....|  ||...|..|...
Zfish   207 --APAPGQLG--ANQWGPR----AIISAANGWAAQP-------APTWQQSYGPQGVWVSTGQPLA 256

  Fly   249 GYGNSGPGSYQGWGAP---PGP------QGPP------PQWSNYAGPQQ---TQGYGGYDMYNST 295
            |||...|.   |.|||   |.|      ..||      ||  .|  |||   ||...||      
Zfish   257 GYGPPLPA---GRGAPAQAPSPFNAFLVAAPPTGGFGAPQ--GY--PQQGFSTQPQFGY------ 308

  Fly   296 STGAPSGPSGGGSWNSWNMPPNSAGPTGAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPRTG 360
            |.|.|.    |..:.:..|||    |...|||                       ||:|..|.|.
Zfish   309 SFGTPQ----GDQFVAQGMPP----PPATPGA-----------------------GPLGFAPATT 342

  Fly   361 PGNSASKSGSEYDYGGYGSGYDYDYSNY----------------VKQEGASNYGAGPRSAYGNDS 409
            |....||:.....        |:.||.|                ..|||..||...| ||||   
Zfish   343 PSQDLSKAAPAQP--------DFSYSQYEYLLRCSTEEGKPFMVELQEGLGNYPQDP-SAYG--- 395

  Fly   410 STQPPYATSQ 419
            .|:|.:...|
Zfish   396 PTRPSHTYVQ 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb27CNP_001162897.1 RRM1_DAZAP1 8..89 CDD:241018 48/80 (60%)
RRM2_DAZAP1 94..173 CDD:240773 40/84 (48%)
dazap1XP_021335308.1 RRM1_DAZAP1 24..105 CDD:241018 48/80 (60%)
RRM2_DAZAP1 127..202 CDD:240773 39/74 (53%)
FtsK <220..>430 CDD:332908 69/253 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589922
Domainoid 1 1.000 76 1.000 Domainoid score I8946
eggNOG 1 0.900 - - E1_KOG4205
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 237 1.000 Inparanoid score I3351
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1565323at2759
OrthoFinder 1 1.000 - - FOG0000417
OrthoInspector 1 1.000 - - oto39043
orthoMCL 1 0.900 - - OOG6_106744
Panther 1 1.100 - - LDO PTHR48027
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1869
SonicParanoid 1 1.000 - - X310
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.830

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