Protein Alignment Hrb27C and msi1b

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001013534.1
• Gene: msi1b / 541389
• ZFINID: ZDB-GENE-050320-86
• Length: 330
• Species: Danio rerio
• Alignment Length: 370
• Identity: 117/370 - (31%)
• Similarity: 162/370 - (43%)
• Gaps: 94/370 - (25%)

  Fly     8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTL 72
            |:|:|||||:||||.|..|||:||::.:.:||::..:.||||||||||.|...|:.||....|.|
Zfish    21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQTRHEL 85

  Fly    73 DGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSR 137
            |.:|||||...||..|........|:|:|||..|.|..|::.:|:::|||.:.::|:|:...:.|
Zfish    86 DSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHR 150

  Fly   138 GFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWG 202
            ||||::||.|..||.|....:..:|.|.||.|||:|::
Zfish   151 GFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE--------------------------- 188

  Fly   203 PHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGYGNSGPGSYQGWGAPPGP 267
                    :....|...|....||.|....|              .|.|..|   |.|:
Zfish   189 --------VMSPTGSSRGRARVMPYGMDAFM--------------LGIGMLG---YPGF------ 222

  Fly   268 QGPPPQWSNYAGPQQTQGYGGY---------DMYNSTSTGAPSGPSGGGSWNSWNMPPNSAG--P 321
                 |.:.|||...|....||         ..||..:..|.:.....||     .|..|||  .
Zfish   223 -----QATTYAGRSYTSLTPGYTYQFPAIPLTAYNPMAAAAAAAAVVRGS-----TPSRSAGFLG 277

  Fly   322 TGAPGAGAGTATDMYSRAQ---------AWATGGPST--TGPVGG 355
            |.:||..|    |:|..|.         :.|:..|||  :..:||
Zfish   278 TSSPGPMA----DLYGTANQESAVSSYLSAASPAPSTGFSHSLGG 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	43/80 (54%)
		RRM2_DAZAP1	94..173	CDD:240773	32/78 (41%)
msi1b	NP_001013534.1	RRM	<16..161	CDD:223796	65/139 (47%)
		RRM1_MSI1	20..96	CDD:241203	41/74 (55%)
		RRM2_MSI	110..183	CDD:240769	29/72 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1565323at2759
OrthoFinder	1	1.000	-	-		FOG0000417
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1869
SonicParanoid	1	1.000	-	-		X310
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	6	5.950