Protein Alignment Hrb27C and Rbp4

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 481
• Identity: 119/481 - (24%)
• Similarity: 176/481 - (36%)
• Gaps: 160/481 - (33%)

  Fly     8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTL 72
            |:|:||||.:||.|.|..:|.:||.:.|.||:::..|..||||||||:.||.:|..|.:..|||:
  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTI 97

  Fly    73 DGRTIDPKPCNPRTLQKPKKGGGY-----------------KVFLGGLPSNVTETDLRTFFNRYG 120
            |.:.::.|...||  |..|:|||.                 ::|||||.....|..:|.:|:::|
  Fly    98 DNKIVETKHALPR--QDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFG 160

  Fly   121 KVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNS 185
            .|..|.::.|:|..:.|.||||.|.:.||.|                 |...||
  Fly   161 PVASVKLLMDRETGRQRAFGFLEFVDPSSAE-----------------KALAPR----------- 197

  Fly   186 TVGGAYGKLGNECSHWGPHHAPINMMQ-----GQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQ- 244
                         .||        ::|     .::.|........||.: ::..||    ..||
  Fly   198 -------------KHW--------ILQTLVEVKRSTQKADRRFRFPIFS-SVRAGY----IPPQP 236

  Fly   245 --QQQYGYGNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPS--- 304
              ...|.|.|.....|......| |......|::|..|...:...|.:|       |.|.||
  Fly   237 ATADSYNYNNPNYNPYLAQSVLP-PSAFTNGWAHYVIPMAPKPTPGQNM-------AASLPSQQL 293

  Fly   305 --------GGGSWNSWNMPPNSAGPTGAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPRTGP 361
                    |...|:|:                  ..|.:|| ||.|.:...:..||..|......
  Fly   294 AEHSLNGHGPDMWSSY------------------PKTGIYS-AQEWTSSKVAEWGPKAGHKHAQT 339

  Fly   362 GNS-----------ASKSGSEYDYG-----------GYGSGY---------------DYDYSNYV 389
            ..:           |:...::.|:|           |.|.|.               ..||..:.
  Fly   340 STNDRAKIDLKELQAATFNNKLDFGARGDADRMSGAGLGLGLTGGAAVGVGAIKKWPTQDYKVFK 404

  Fly   390 KQEGASNYGAGPRSAYGNDSSTQPPY 415
            ..:..:| |..|:  .|.:::| |||
  Fly   405 PAKSPTN-GVIPK--IGKEATT-PPY 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	36/80 (45%)
		RRM2_DAZAP1	94..173	CDD:240773	25/95 (26%)
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	34/76 (45%)
		RRM2_hnRNPA_like	137..209	CDD:240774	28/120 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45460567
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840