Protein Alignment Hrb27C and msi2b

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_957403.1
• Gene: msi2b / 394084
• ZFINID: ZDB-GENE-040426-1268
• Length: 408
• Species: Danio rerio
• Alignment Length: 474
• Identity: 130/474 - (27%)
• Similarity: 194/474 - (40%)
• Gaps: 154/474 - (32%)

  Fly     3 EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
            :.:.||:|:|||||:|:.::|..||.:||:|.:|:||::..:.||||||||||||..:|:.||..
Zfish    17 QHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81

  Fly    68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQE 132
            ..|.||.:|||||...||..|........|:|:|||.:|....|::.:|.::|||.:.::|:|:.
Zfish    82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146

  Fly   133 KKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNE 197
            ..:.|||||::||.|..||.|....:..:|.|.||.|||:|::
Zfish   147 TNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKE---------------------- 189

  Fly   198 CSHWGPHHAPINMMQGQNGQMGGPPLNMP--------IGAPNMMP----GYQGWGTSPQQQQYG- 249
                      :....|..|:..|.|..|.        :..||::.    ||.|:..|...|..|
Zfish   190 ----------VMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQFPGF 244

  Fly   250 ----YG-----------------------------NSGPG--SYQGWGAPPGPQGPPPQWSNYA- 278
                ||                             ::|||  .|..:.:|...:|||..:::|.
Zfish   245 PATAYGPVAAAAAVAAARGSGRGARGRGGYAAYPQSTGPGFPDYGFYSSPSDQRGPPFSFADYGS 309

  Fly   279 -GPQQT----------------QGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSAGPTGAPG 326
             |||..                |.....|.|.|..|..|.                   |...||
Zfish   310 LGPQAAQLLQSEHATSACNSPLQHLASPDQYKSPGTNPPR-------------------PGAFPG 355

  Fly   327 AGA-GTATDMYSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGSEYDYGGYGSGYDYDYSNYVK 390
            |.: |...|:|         ||::..       :|.||..|.:..:     .|||:.:..
Zfish   356 ASSPGPVADLY---------GPTSQD-------SGVGNYISAASPQ-----PGSGFGHSI----- 394

  Fly   391 QEGASNYGAGP--RSAYGN 407
                    |||  .:|:.|
Zfish   395 --------AGPLIATAFTN 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	42/80 (53%)
		RRM2_DAZAP1	94..173	CDD:240773	31/78 (40%)
msi2b	NP_957403.1	RRM	<2..162	CDD:223796	64/144 (44%)
		RRM1_MSI	23..97	CDD:241020	39/73 (53%)
		RRM2_MSI	111..184	CDD:240769	28/72 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1565323at2759
OrthoFinder	1	1.000	-	-		FOG0000417
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1869
SonicParanoid	1	1.000	-	-		X310
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	6	5.850