Protein Alignment Hrb27C and hnrnpa1b

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_956398.1
• Gene: hnrnpa1b / 378453
• ZFINID: ZDB-GENE-030912-14
• Length: 422
• Species: Danio rerio
• Alignment Length: 444
• Identity: 135/444 - (30%)
• Similarity: 192/444 - (43%)
• Gaps: 102/444 - (22%)

  Fly     2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
            |.::..|||:||||:|||.::|..:|.::|.:.||||||:..:.|||||||||::....||..:.
Zfish    28 EPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDEVNASMD 92

  Fly    67 NGPHTLDGRTIDPKPCNPRTLQKPKKGGGY------KVFLGGLPSNVTETDLRTFFNRYGKVTEV 125
            ..||.:|||.::||    |.:.:......:      |:|:||:..:..|..||.:|:::||:..|
Zfish    93 ARPHKVDGRLVEPK----RAVSREDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFDQFGKIEVV 153

  Fly   126 VIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKA--------EPRDGSGGQNS 182
            .||.|.:....|||.|::|::..||:.:..::|..:||...|::||        ..|.|.||...
Zfish   154 EIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKALSKQEMANTGRGGGGGGGG 218

  Fly   183 NNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQ 247
            .    ||.:.:.||.              .|.|...||.      |......||.|.|
Zfish   219 G----GGNFNRYGNN--------------GGYNNDFGGG------GGGGNRDGYFGRG------- 252

  Fly   248 YGYGNS--GPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWN 310
             |.||:  |.|...|:|                        ||.|.||: :.|...|..|||..|
Zfish   253 -GRGNNFGGGGGGGGYG------------------------GGGDCYNN-NNGFGGGGYGGGGGN 291

  Fly   311 SWNMPPNSAGPTGAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGSEYDYG 375
            ....|.|..|..|..|.|.|  ...|.. |....||.::.|..||......|| .:..|..:..|
Zfish   292 GGGSPGNYGGNRGYGGGGGG--GHGYGN-QGGGYGGGNSGGGGGGYNNYNNGN-GNFGGGNFGGG 352

  Fly   376 GYGSG-------------YDYDYSNYVKQEGASNYGAGPRSA------YGNDSS 410
            |.|.|             |:...|||...:|  |:|.|.|::      ||..||
Zfish   353 GGGGGNSGGGGNYNDFGNYNSQQSNYGPMKG--NFGGGGRNSGPYGGGYGGGSS 404

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	38/80 (48%)
		RRM2_DAZAP1	94..173	CDD:240773	27/92 (29%)
hnrnpa1b	NP_956398.1	RRM	<19..187	CDD:223796	60/162 (37%)
		RRM_SF	31..111	CDD:302621	38/83 (46%)
		RRM2_hnRNPA1	124..200	CDD:241024	26/75 (35%)
		HnRNPA1	367..>387	CDD:288479	6/21 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910