Protein Alignment Hrb27C and Caper

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Alignment Length: 279
• Identity: 60/279 - (21%)
• Similarity: 106/279 - (37%)
• Gaps: 68/279 - (24%)

  Fly     2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
            ||.:...:|...||......:|..:|...|.:.|..::..|::.|.:|..::.|.||.:|...|
  Fly   232 EERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALAL- 295

  Fly    67 NGPHTLDGRTIDPKPC-------------NPRTLQKPKK-GGGYKVFLGGLPSNVTETDLRTFFN 117
                .|.|:.:...|.             |.....:||. .|..::::|.|..|:||..||..|.
  Fly   296 ----GLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFE 356

  Fly   118 RYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNS 182
            .:||:..:.::.|.|..:|:|:||:::......:....:    |||.:
  Fly   357 PFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQ----LNGFE----------------- 400

  Fly   183 NNSTVGGAYGKLGNECSHWGPHHAPINMMQ--------GQNGQM-------GGPPLNMPIGAPNM 232
                :.|...|:||.......:...::..:        |..|::       .|..|.:|..|.|.
  Fly   401 ----LAGRLMKVGNVTERLDMNTTSLDTDEMDRTGIDLGATGRLQLMFKLAEGAGLAVPQAAANA 461

  Fly   233 MPGYQGWGTSPQ----QQQ 247
            :     ..|:||    |||
  Fly   462 L-----LATAPQPAPLQQQ 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	19/93 (20%)
		RRM2_DAZAP1	94..173	CDD:240773	20/78 (26%)
Caper	NP_609095.1	RRM1_RBM39_like	238..310	CDD:240729	18/76 (24%)
		RRM2_RBM23_RBM39	337..409	CDD:240730	21/96 (22%)
		RBM39linker	425..500	CDD:292157	13/56 (23%)
		RRM3_RBM39_like	483..567	CDD:240731

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463946
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840