Sequence 1: | NP_001162897.1 | Gene: | Hrb27C / 33968 | FlyBaseID: | FBgn0004838 | Length: | 421 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_112420.1 | Gene: | HNRNPA1 / 3178 | HGNCID: | 5031 | Length: | 372 | Species: | Homo sapiens |
Alignment Length: | 439 | Identity: | 135/439 - (30%) |
---|---|---|---|
Similarity: | 195/439 - (44%) | Gaps: | 114/439 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
Fly 67 NGPHTLDGRTIDPKPCNPRTLQKPKKGGGY----KVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
Fly 128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKA-------------EPRDGSGG 179
Fly 180 QNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQN--------GQMGGPPLNMPIGAPNMMPGY 236
Fly 237 QGWGTSPQQQQYGYGNSGP---GSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTG 298
Fly 299 APSGPS-----GGGSWNSWNMPPNSAGPTGAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPR 358
Fly 359 TGPGNSASKSGSEY-----DYGGYGSGYDYDYSNYVKQEGASNYGAGPR 402 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Hrb27C | NP_001162897.1 | RRM1_DAZAP1 | 8..89 | CDD:241018 | 38/80 (48%) |
RRM2_DAZAP1 | 94..173 | CDD:240773 | 29/95 (31%) | ||
HNRNPA1 | NP_112420.1 | Globular A domain | 4..94 | 39/86 (45%) | |
RRM1_hnRNPA1 | 12..92 | CDD:410154 | 37/79 (47%) | ||
Globular B domain | 95..185 | 29/89 (33%) | |||
RRM2_hnRNPA3 | 105..184 | CDD:409996 | 28/78 (36%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 182..216 | 9/49 (18%) | |||
RNA-binding RGG-box | 218..240 | 6/27 (22%) | |||
HnRNPA1 | 307..344 | CDD:402981 | 13/64 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 317..372 | 19/94 (20%) | |||
Nuclear targeting sequence (M9) | 320..357 | 11/64 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |