DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb27C and SPBC660.15

DIOPT Version :9

Sequence 1:NP_001162897.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_595094.1 Gene:SPBC660.15 / 2541150 PomBaseID:SPBC660.15 Length:474 Species:Schizosaccharomyces pombe


Alignment Length:369 Identity:126/369 - (34%)
Similarity:181/369 - (49%) Gaps:70/369 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGP 69
            |.||:|:|||:||||.::|..||.:||:::||.||:::.:||||||||:||.:|..||.|:.. .
pombe   161 EDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK-E 224

  Fly    70 HTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKK 134
            |.|||:.||||...||..|:...    |:|:||:|.:.||.:.|.|||::|:|.:..:|.|::..
pombe   225 HHLDGKIIDPKRAIPREEQEKTA----KMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTG 285

  Fly   135 KSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECS 199
            :.|||||:::|.||:||...::.||.::||.||:|:|.|:  :..::|::              .
pombe   286 RPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATPK--ASLRDSHD--------------R 334

  Fly   200 HWGPHHAPINMMQGQNGQM-GGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGYG-NSGPGSYQGWG 262
            |...:|...|....||..| ||.       .|.||..|.     .|.|||... .:.|.:.   |
pombe   335 HQHGYHGNANPYYAQNMNMYGGM-------TPAMMAQYY-----RQMQQYMEAMRNMPAAA---G 384

  Fly   263 APPGPQGPPP----QWSNYAGPQQTQGYGGYD---MYNSTSTGAPSGPSGGGSWNSWNMPPNSAG 320
            |.|.||...|    .|..    ||.||...:|   |...|..|.|..||          .|:.:.
pombe   385 AVPYPQPVMPAGMADWQQ----QQQQGAAYFDPSKMNQGTGDGVPFSPS----------MPSGSS 435

  Fly   321 PTGAPGAGAGTATDMYSRAQAWATGGPSTTGPVGGMPRTGPGNS 364
            ..|..|...|.......|.:....||           .||.|:|
pombe   436 RGGYHGRNPGGPNRQRYRGRRDGRGG-----------NTGGGHS 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb27CNP_001162897.1 RRM1_DAZAP1 8..89 CDD:241018 42/80 (53%)
RRM2_DAZAP1 94..173 CDD:240773 33/78 (42%)
SPBC660.15NP_595094.1 RRM1_Hrp1p 165..240 CDD:241021 39/75 (52%)
RRM2_Hrp1p 248..322 CDD:240776 32/73 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 77 1.000 Domainoid score I2414
eggNOG 1 0.900 - - E1_KOG4205
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 179 1.000 Inparanoid score I1134
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000417
OrthoInspector 1 1.000 - - oto100469
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR48027
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1869
SonicParanoid 1 1.000 - - X310
TreeFam 1 0.960 - -
109.950

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