DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb27C and HNRNPA3

DIOPT Version :10

Sequence 1:NP_476869.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_919223.1 Gene:HNRNPA3 / 220988 HGNCID:24941 Length:378 Species:Homo sapiens


Alignment Length:419 Identity:132/419 - (31%)
Similarity:192/419 - (45%) Gaps:94/419 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
            |.::..|||:||||:|||.::|..:|.::|.:.|||||::.::.|||||||||::....|:..:.
Human    30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94

  Fly    67 NGPHTLDGRTIDPKPCNPRTLQKPKKGGGY----KVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
            ..||.:|||.::||....|  :...|.|.:    |:|:||:..:..|.:||.:|.:|||:..:.:
Human    95 ARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157

  Fly   128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD---------GSGGQNSN 183
            |.|::..|.|||.|::|::..:|:.:..::|..:||...|:|||..:.         |.||.:.|
Human   158 MEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGN 222

  Fly   184 NSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQY 248
            ....||.:|..|...              |:.|..||            ..|| |.|....:..|
Human   223 FMGRGGNFGGGGGNF--------------GRGGNFGG------------RGGY-GGGGGGSRGSY 260

  Fly   249 GYGNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAP------SGPSGGG 307
            |   .|.|.|.|:|...|..|..|.:|:..      ||||         |.|      .|..|||
Human   261 G---GGDGGYNGFGGDGGNYGGGPGYSSRG------GYGG---------GGPGYGNQGGGYGGGG 307

  Fly   308 SWNSWNMPPNSAGPTGAPGAGAGTATDM--YSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGS 370
            .::.:|...|..|  |..| |.|...|.  || .|..:..||...|..||          ..|||
Human   308 GYDGYNEGGNFGG--GNYG-GGGNYNDFGNYS-GQQQSNYGPMKGGSFGG----------RSSGS 358

  Fly   371 EYDYGGYGSGYDYDYSNYVKQEGASNYGA 399
            .|. ||||||           .|:..||:
Human   359 PYG-GGYGSG-----------GGSGGYGS 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb27CNP_476869.1 RRM1_hnRNPA_hnRNPD_like 9..80 CDD:409763 32/70 (46%)
RRM2_DAZAP1 94..173 CDD:409765 28/82 (34%)
HNRNPA3NP_919223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 1/3 (33%)
RRM1_hnRNPA_like 36..113 CDD:409992 35/76 (46%)
RRM2_hnRNPA3 126..205 CDD:409996 27/78 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..225 4/20 (20%)
HnRNPA1 331..>347 CDD:463312 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..378 20/63 (32%)

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