DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb27C and HNRNPA3

DIOPT Version :9

Sequence 1:NP_001162897.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001317178.1 Gene:HNRNPA3 / 220988 HGNCID:24941 Length:378 Species:Homo sapiens


Alignment Length:419 Identity:132/419 - (31%)
Similarity:192/419 - (45%) Gaps:94/419 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ 66
            |.::..|||:||||:|||.::|..:|.::|.:.|||||::.::.|||||||||::....|:..:.
Human    30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94

  Fly    67 NGPHTLDGRTIDPKPCNPRTLQKPKKGGGY----KVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 127
            ..||.:|||.::||....|  :...|.|.:    |:|:||:..:..|.:||.:|.:|||:..:.:
Human    95 ARPHKVDGRVVEPKRAVSR--EDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEV 157

  Fly   128 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD---------GSGGQNSN 183
            |.|::..|.|||.|::|::..:|:.:..::|..:||...|:|||..:.         |.||.:.|
Human   158 MEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSAGSQRGRGGGSGN 222

  Fly   184 NSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQY 248
            ....||.:|..|...              |:.|..||            ..|| |.|....:..|
Human   223 FMGRGGNFGGGGGNF--------------GRGGNFGG------------RGGY-GGGGGGSRGSY 260

  Fly   249 GYGNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAP------SGPSGGG 307
            |   .|.|.|.|:|...|..|..|.:|:..      ||||         |.|      .|..|||
Human   261 G---GGDGGYNGFGGDGGNYGGGPGYSSRG------GYGG---------GGPGYGNQGGGYGGGG 307

  Fly   308 SWNSWNMPPNSAGPTGAPGAGAGTATDM--YSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGS 370
            .::.:|...|..|  |..| |.|...|.  || .|..:..||...|..||          ..|||
Human   308 GYDGYNEGGNFGG--GNYG-GGGNYNDFGNYS-GQQQSNYGPMKGGSFGG----------RSSGS 358

  Fly   371 EYDYGGYGSGYDYDYSNYVKQEGASNYGA 399
            .|. ||||||           .|:..||:
Human   359 PYG-GGYGSG-----------GGSGGYGS 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb27CNP_001162897.1 RRM1_DAZAP1 8..89 CDD:241018 36/80 (45%)
RRM2_DAZAP1 94..173 CDD:240773 28/82 (34%)
HNRNPA3NP_001317178.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35 1/4 (25%)
RRM1_hnRNPA_like 36..113 CDD:409992 35/76 (46%)
RRM2_hnRNPA3 126..205 CDD:409996 27/78 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..225 4/20 (20%)
HnRNPA1 331..>347 CDD:402981 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..378 20/63 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1869
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

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