Protein Alignment Hrb27C and hrpa-2

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_741783.1
• Gene: hrpa-2 / 180791
• WormBaseID: WBGene00019249
• Length: 336
• Species: Caenorhabditis elegans
• Alignment Length: 237
• Identity: 65/237 - (27%)
• Similarity: 107/237 - (45%)
• Gaps: 47/237 - (19%)

  Fly     8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTL 72
            |||:||||.:||.|.|..||.::|.::|.:|:::..:..||||||||||...:....:.:.||.|
 Worm    71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPHKL 135

  Fly    73 DGRTIDPKPCNPRTLQ---------KPKKGGGYKVFLGGLPSNVTETD-LRTFFNRYGKVTEVVI 127
            .|:|:|.|...||...         :.....|.|:.|.|:.:.|...| ||.:|..:|.:.:|.|
 Worm   136 GGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEI 200

  Fly   128 MYDQEKKKSRGFGFLSFEEESSVE---------HVTNERYINL-------NGKQV---------- 166
            :     .:.||.||:.:|::.|.:         |:.|||.|.:       ||...
 Worm   201 L-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGSTYWKRPQSQSHS 260

  Fly   167 ------EIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWG 202
                  ::.:...:||......|:|:..........:.::.|
 Worm   261 QRDLFEQLSQLNLKDGDRKSTGNSSSAADTPQNFDEDSNYGG 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	35/89 (39%)
		RRM2_DAZAP1	94..173	CDD:240773	25/111 (23%)
hrpa-2	NP_741783.1	RRM	<62..230	CDD:223796	53/163 (33%)
		RRM1_hnRNPA_like	71..148	CDD:241022	33/76 (43%)
		RRM_SF	183..240	CDD:302621	18/61 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1565323at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920