Protein Alignment Hrb27C and hrpa-1

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001040945.1
• Gene: hrpa-1 / 177101
• WormBaseID: WBGene00001999
• Length: 347
• Species: Caenorhabditis elegans
• Alignment Length: 380
• Identity: 116/380 - (30%)
• Similarity: 170/380 - (44%)
• Gaps: 87/380 - (22%)

  Fly     1 MEEDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVL 65
            :|.:...|:|||||:..||.:.:..::.:||:|.|.:||::..:.||||||||||:..|.|:..:
 Worm    17 LEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 81

  Fly    66 QNGPHTLDGRTIDPKPCNPRTLQKPKKG--GGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIM 128
            :..||.:||:|:|||...||..:...:.  ...::::.|:..:.||..|..:|.:||.||:..|:
 Worm    82 KQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEII 146

  Fly   129 YDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKK--------------------AEP 173
            .|:..:|.|||||::|::..||:....::...:||.:.:::|                    ...
 Worm   147 LDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGRS 211

  Fly   174 RDGSGGQNSNNSTVGGAYG---KLGNECSHWGPHHAPINMMQGQN-----GQMGGPPLNMPIGAP 230
            |||..|..:.....||.:|   :.|...::.||.........|.|     ||.||
 Worm   212 RDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGG---------- 266

  Fly   231 NMMPGYQGWGTSPQQQQ--YGYGNSGPGSYQGWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMYN 293
               .|..||| .|||||  .|:|..|.|...|||                ||||.| .||:
 Worm   267 ---GGQGGWG-GPQQQQGGGGWGQQGGGGQGGWG----------------GPQQQQ-QGGW---- 306

  Fly   294 STSTGAPSGPSGGGSWNSWNMPPNSAGPTGAPGAGAGTATDMYSRAQAW--ATGG 346
                |.|....|||.|          |..|....|.|.    .|.||.|  |.||
 Worm   307 ----GGPQQGGGGGGW----------GGQGQQQGGWGG----QSGAQQWAHAQGG 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	36/80 (45%)
		RRM2_DAZAP1	94..173	CDD:240773	23/98 (23%)
hrpa-1	NP_001040945.1	RRM1_hnRNPA_like	24..101	CDD:241022	34/76 (45%)
		RRM2_hnRNPA_like	115..187	CDD:240774	22/71 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910