Protein Alignment Hrb27C and Msi1

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_032655.1
• Gene: Msi1 / 17690
• MGIID: 107376
• Length: 362
• Species: Mus musculus
• Alignment Length: 415
• Identity: 132/415 - (31%)
• Similarity: 187/415 - (45%)
• Gaps: 83/415 - (20%)

  Fly     8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTL 72
            |:|:|||||:||||.|..||.:||::.:|:||::..:.||||||||||.|...|:.||....|.|
Mouse    21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85

  Fly    73 DGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSR 137
            |.:|||||...||..|........|:|:|||..|.|..|::.:|.::|||.:.::|:|:...:.|
Mouse    86 DSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHR 150

  Fly   138 GFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWG 202
            ||||::||.|..||.|....:..:|.|.||.|||:|::..       |..|.|.|:     |...
Mouse   151 GFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVM-------SPTGSARGR-----SRVM 203

  Fly   203 PHHAPINMMQGQNGQMGGPPLNMPIGAPNMMPGYQGWGTSPQQQQYGYGNSGPGSYQGWGAPPGP 267
            |:        |.:..|.|      ||    |.||.|:      |...|.:.   ||.|
Mouse   204 PY--------GMDAFMLG------IG----MLGYPGF------QATTYASR---SYTG------- 234

  Fly   268 QGPPPQWSNYAGPQQTQGYGGYDMYNSTSTGAPSGPSGGGSWNSWNMPPNSAGPTGAPGAGA--- 329
                      ..|..|..:..:.:..|....||..|      ....:|..:.||..|..|.|
Mouse   235 ----------LAPGYTYQFPEFRVERSPLPSAPVLP------ELTAIPLTAYGPMAAAAAAAAVV 283

  Fly   330 -GTATDMYSRAQAWATGGPSTTGPVGGMPRTGPGNSASKSGSEYDYGGYGSGYDYDYSNYVKQEG 393
             ||.:..::.|.. ....||.||  |.:..|.||..|...|:        :..|...|:|:
Mouse   284 RGTGSHPWTMAPP-PGSTPSRTG--GFLGTTSPGPMAELYGA--------ANQDSGVSSYI---- 333

  Fly   394 ASNYGAGPRSAYGNDSSTQPPYATS 418
             |.....|.:.:|: |...|..||:
Mouse   334 -SAASPAPSTGFGH-SLGGPLIATA 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	43/80 (54%)
		RRM2_DAZAP1	94..173	CDD:240773	32/78 (41%)
Msi1	NP_032655.1	RRM1_MSI	22..96	CDD:241020	40/73 (55%)
		PABP-1234	<32..312	CDD:130689	109/344 (32%)
		RRM2_MSI	110..183	CDD:240769	29/72 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1565323at2759
OrthoFinder	1	1.000	-	-		FOG0000417
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1869
SonicParanoid	1	1.000	-	-		X310
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.850