DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb27C and LOC1270267

DIOPT Version :10

Sequence 1:NP_476869.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_308949.5 Gene:LOC1270267 / 1270267 VectorBaseID:AGAMI1_007420 Length:271 Species:Anopheles gambiae


Alignment Length:112 Identity:31/112 - (27%)
Similarity:55/112 - (49%) Gaps:11/112 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 KVFLG--GLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFE--EESSVEHVTNER 157
            ||.|.  .|....||.:|...|:::|.:.:..::.|.:..:||||||:.||  |::.|.| ....
Mosquito    95 KVVLAVFNLSVYTTEAELYDTFSKFGPLRKTTVVLDAKTGRSRGFGFVYFESAEDAKVAH-DQAN 158

  Fly   158 YINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPH 204
            .|.:..:::.:      |.|.....::.|.|..|||:.:..:.:|.|
Mosquito   159 GIEIGDRRIRV------DFSATNKPHDPTPGVYYGKVSHPKTGYGGH 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb27CNP_476869.1 RRM1_hnRNPA_hnRNPD_like 9..80 CDD:409763
RRM2_DAZAP1 94..173 CDD:409765 22/79 (28%)
LOC1270267XP_308949.5 None
Blue background indicates that the domain is not in the aligned region.

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