Protein Alignment Hrb27C and msi2

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: XP_004911774.1
• Gene: msi2 / 100038158
• XenbaseID: XB-GENE-488852
• Length: 407
• Species: Xenopus tropicalis
• Alignment Length: 427
• Identity: 134/427 - (31%)
• Similarity: 200/427 - (46%)
• Gaps: 85/427 - (19%)

  Fly     3 EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
            :.:.||:|:|||||:|:.::|..||.:||:|.:|:||::..:.|||||||||||||.:|:.||..
 Frog    17 QHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81

  Fly    68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQE 132
            ..|.||.:|||||...||..|........|:|:|||.:|....|::.:|.::|||.:.::|:|:.
 Frog    82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKT 146

  Fly   133 KKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD-----GSGGQNSNNSTVGGAY- 191
            ..:.|||||::||.|..||.|....:..:|.|.||.|||:|::     |:.|:.........|:
 Frog   147 TNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTMDAFM 211

  Fly   192 ---GKLG--NECSHWG---PHHAPINMMQGQNGQMGGPPLNM---PIGAPNM-------MPGYQG 238
               |.||  |..:.:|   |..||     ..:.|..|.|...   |:.|..:       :|.| |
 Frog   212 LGMGMLGYPNFVATYGRGYPGFAP-----SYSYQFPGFPAAAAYGPVAAAAVAAARGSGIPDY-G 270

  Fly   239 WGTSPQQQQ-----YGYGNSGPGSYQ------GWGAPPGPQGPPPQWSNYAGPQQTQGYGGYDMY 292
            :.|:|..|:     ..||:.||.:.|      ...|...|....|....:..|.....|.....|
 Frog   271 FYTTPGDQRATLSFADYGSMGPRTAQMLRSEHAASASNSPLHHLPSPDQFKSPAVLNSYSAQPNY 335

  Fly   293 NSTSTGAPSGPSGGGSWNSWNMPPNSAGPTGAPGAGA-GTATDMYSRAQAWATGGPSTTGPVGGM 356
                 |||:.|:|.          |.|.|.|.|||.: |...|:|..|.
 Frog   336 -----GAPASPAGA----------NPARPGGFPGANSPGPVADLYGTAS---------------- 369

  Fly   357 PRTGPGN----SASKSGSEYDYG--------GYGSGY 381
            ..:|.||    ::.:.||.:.:|        .:.:||
 Frog   370 QDSGVGNYISAASPQPGSGFSHGIAGPLIATAFTNGY 406

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	43/80 (54%)
		RRM2_DAZAP1	94..173	CDD:240773	31/78 (40%)
msi2	XP_004911774.1	RRM	<2..162	CDD:223796	65/144 (45%)
		RRM1_MSI	23..97	CDD:241020	40/73 (55%)
		RRM2_MSI	111..184	CDD:240769	28/72 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1565323at2759
OrthoFinder	1	1.000	-	-		FOG0000417
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X310
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.920