Protein Alignment Hrb27C and msi2a

DIOPT Version :9

• Sequence 1: NP_001162897.1
• Gene: Hrb27C / 33968
• FlyBaseID: FBgn0004838
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: XP_009303812.1
• Gene: msi2a / 100002680
• ZFINID: ZDB-GENE-030826-25
• Length: 407
• Species: Danio rerio
• Alignment Length: 407
• Identity: 125/407 - (30%)
• Similarity: 192/407 - (47%)
• Gaps: 68/407 - (16%)

  Fly     3 EDERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 67
            :.:.||:|:|||||:|:.::|..|||:||:|.:|:||::..:.|||||||:||||.::|:.||..
Zfish    17 QHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81

  Fly    68 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQE 132
            ..|.||.:|||||...||..|........|:|:|||.::....|::.:|.::|||.:.::|:|:.
Zfish    82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKT 146

  Fly   133 KKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRD---------------------- 175
            ..:.|||||::||.|..||.|....:..:|.|.||.|||:|::
Zfish   147 TNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARSLPYTMDAFM 211

  Fly   176 -GSGGQNSNN--STVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPI----GAPNMM 233
             |.|..:..|  :|.|..|.......|:..|         |......||.....:    |:....
Zfish   212 LGMGMLSYPNIVATYGRGYTGFSPSYSYQFP---------GFPATAYGPVAAAAVAAARGSGRAT 267

  Fly   234 PGYQGWGTSPQQQQYGYGNSGPG--SYQGWGAPPGPQGPPPQWSNYA--GPQQTQGYGGYDMYNS 294
            .|..|:...||       |:|||  .|..:..|...:..|..:::||  ||...|......:.::
Zfish   268 RGRSGYMAYPQ-------NAGPGFPDYGFYSGPGDQRAAPCSFADYATLGPHTGQMLQSEHVTST 325

  Fly   295 TSTGAPSGPSGGGSWNSWNMPPNSAGPTGAPGAGA-GTATDMYSRAQAWATGGPSTTGPVGG--- 355
            .::.:...||.....:|...||.   |.|.|||.: |...|:|         |||:.....|
Zfish   326 CNSPSQHHPSPDHFKSSGANPPR---PGGFPGANSPGPVADLY---------GPSSQDSAVGNYI 378

  Fly   356 ---MPRTGPGNSASKSG 369
               .|:.|.|.:.|.:|
Zfish   379 SAASPQPGSGFNHSIAG 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb27C	NP_001162897.1	RRM1_DAZAP1	8..89	CDD:241018	42/80 (53%)
		RRM2_DAZAP1	94..173	CDD:240773	30/78 (38%)
msi2a	XP_009303812.1	RRM	<2..162	CDD:223796	63/144 (44%)
		RRM1_MSI	23..97	CDD:241020	39/73 (53%)
		RRM2_MSI	111..184	CDD:240769	27/72 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1565323at2759
OrthoFinder	1	1.000	-	-		FOG0000417
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X310
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.820