DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and NGR1

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_009771.3 Gene:NGR1 / 852513 SGDID:S000000416 Length:672 Species:Saccharomyces cerevisiae


Alignment Length:173 Identity:38/173 - (21%)
Similarity:69/173 - (39%) Gaps:16/173 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PSDRKVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTV 69
            |::..|:||.|.....:..|..:|..:|.:.:|.|. |.....||:||...||..:::||.|..|
Yeast   357 PTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIP-NGKNCGFVKFEKRIDAEASIQGLQGFIV 420

  Fly    70 CGRRARVELSTGKYARSGGGGG----GGGGGGGGGGLGGRDRGGGGRGDDKCYE--CGGRGHFAR 128
            .|  :.:.||.|:.:.|.....    |........||.............:..|  ...:.....
Yeast   421 GG--SPIRLSWGRPSSSNAKTNSTIMGASQYMSSNGLRAPSAASSVDNSKQILEQYAEDKRRLFL 483

  Fly   129 HCRERKARQRRRSNSFSRSRSTSRRRRT-------RSKSGTRS 164
            |.::::.:|:::..:||..:........       |:|:|:.|
Yeast   484 HQQQQQQQQQQQDGNFSMEQMAHNNYYNYNNYDYHRNKNGSHS 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 23/71 (32%)
NGR1NP_009771.3 RRM1_NGR1_NAM8_like 35..180 CDD:410023
RRM2_NGR1_NAM8_like 191..270 CDD:410025
RRM3_NGR1_NAM8_like 359..430 CDD:409782 23/73 (32%)
Blue background indicates that the domain is not in the aligned region.

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