Protein Alignment x16 and AtRZ-1c

DIOPT Version :10

• Sequence 1: NP_723226.1
• Gene: x16 / 33967
• FlyBaseID: FBgn0028554
• Length: 258
• Species: Drosophila melanogaster
• Sequence 2: NP_196048.1
• Gene: AtRZ-1c / 830307
• AraportID: AT5G04280
• Length: 310
• Species: Arabidopsis thaliana
• Alignment Length: 283
• Identity: 84/283 - (29%)
• Similarity: 107/283 - (37%)
• Gaps: 71/283 - (25%)

  Fly     9 KVYVGDLGNNARKNDLEYVFGAYGSLR--SVWIARN---PPGFAFVEFESARDAADAVRGLDGRT 68
            :::||.|.......|||..|..:|.:.  .:.:.|:   ..||.|:.|...|...:::|.:.||.
plant     8 RIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREMHGRD 72

  Fly    69 VCGRRARVELSTGKYARSGGGGGGGGGG-------GGGGGLGGRDRGGGGRGDDKCYECGGRGHF 126
            ...|...|..:..|..|..|...|..||       .|.|..||...|||..|:|:|::||..||:
plant    73 FGDRVISVNRAEPKLGRDDGESHGSRGGRDSGYSIAGKGSFGGGGGGGGRVGEDECFKCGRVGHW 137

  Fly   127 ARHCRERKARQRRRSNSFSRSRSTSRRRRTRSKSGTRSRSRSAGSVGRRSGR------SNGR-DE 184
            ||.|                          .|..|.|     .|.||..|.|      |:|| |.
plant   138 ARDC--------------------------PSAGGGR-----GGPVGGFSSRASAYGGSDGRVDR 171

  Fly   185 NGSASRYSDHERNGSGAVDSPPPPKRRY--EDEDDDRVRGSPRSRSRS-RSASPAVR-------- 238
            .....||.|.||    .:|.......||  .|..|.|....||.|..| |.|:||.|
plant   172 YADRDRYVDRER----YIDDRYDGAARYGARDRFDSREAYIPRDRYASDRYAAPADRFAGGDRYS 232

  Fly   239 RGS---PPRRRGDSSASRSVSRD 258
            |||   ||   |....:||..||
plant   233 RGSDRYPP---GSYDKARSFERD 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
x16	NP_723226.1	RRM_SRSF3_like	9..81	CDD:409808	19/76 (25%)
AtRZ-1c	NP_196048.1	RRM	8..89	CDD:440488	20/80 (25%)
		zf-CCHC	128..143	CDD:395050	8/40 (20%)
		U2AF_lg	170..>256	CDD:273727	31/90 (34%)