DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and SRSF6

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_006266.2 Gene:SRSF6 / 6431 HGNCID:10788 Length:344 Species:Homo sapiens


Alignment Length:351 Identity:106/351 - (30%)
Similarity:139/351 - (39%) Gaps:110/351 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRR 73
            :||:|.|..|.|:.|::..|..||.|..|.:..   |:.|||||.:|||.|||..|:|:.:||.|
Human     3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKN---GYGFVEFEDSRDADDAVYELNGKELCGER 64

  Fly    74 ARVELSTGKYARSGG---GGGGGGGGGGGGGLGGRDRGG-------------------------- 109
            ..||.:.|......|   |...||||.......|||:.|                          
Human    65 VIVEHARGPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDF 129

  Fly   110 ---GG--------------------------RGDDKC--YECGGR------------------GH 125
               .|                          |..||.  .|..||                  |.
Human   130 MRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPRTSHRRSYSGS 194

  Fly   126 FARHCRERKARQRRRSNSFSRSRSTSR-RRRTRSKSGTRSRSRSAGSVGRRSGRSNGRDENG--- 186
            .:|....|::|.|.|.:|.|||||.|: |.|:||:|..||||||.|...|...:|..:.:.|   
Human   195 RSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHS 259

  Fly   187 -SASRYSD-HERNGSGAVDSPPPPKRRYEDEDDDRVRGSPRSRSRSRSASP------AVRRGSPP 243
             |.||..| :|::.|.:....|      ::.....::...||||:|||.||      ..|..|||
Human   260 HSRSRSKDEYEKSRSRSRSRSP------KENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPP 318

  Fly   244 RRRGDS-----------SASRSVSRD 258
            .:|..|           |.|||.|||
Human   319 PKRATSRSRSRSRSKSRSRSRSSSRD 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 31/71 (44%)
SRSF6NP_006266.2 RRM1_SRSF6 1..72 CDD:410009 31/71 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..103 9/27 (33%)
RRM2_SRSF6 110..182 CDD:410159 7/71 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 176..344 55/173 (32%)

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