DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and SRSF5

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_008856.2 Gene:SRSF5 / 6430 HGNCID:10787 Length:272 Species:Homo sapiens


Alignment Length:311 Identity:88/311 - (28%)
Similarity:112/311 - (36%) Gaps:133/311 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRR 73
            :|::|.|...||:.|:|..|..||.:|.:.:.|   ||.|||||..|||.|||..|||:.:|..|
Human     5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGKELCSER 66

  Fly    74 ARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRG------------------------- 113
            ..:|     :||:                  |.|||.|||                         
Human    67 VTIE-----HARA------------------RSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTEN 108

  Fly   114 ----------------DDKCYECG--------------GRGHFA--------------------- 127
                            .|...:.|              |...||                     
Human   109 RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRK 173

  Fly   128 --------RHCRER-KARQRRRSNSFSRSRSTSRRRRTRSKSGTRSRSRSAGSVGRRSGRSNGRD 183
                    ||.|.| ::|.|.||:|.|||||.||.|::.|:|.:||||||         ||..|.
Human   174 IKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRS---------RSKSRS 229

  Fly   184 ENGSASRYSDHERNGSGAVDSPPPPKRRYEDEDDDRVRGSPRSRSRSRSAS 234
            .:.|.......:|..|....||....|:             ||||||||.|
Human   230 VSRSPVPEKSQKRGSSSRSKSPASVDRQ-------------RSRSRSRSRS 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 31/71 (44%)
SRSF5NP_008856.2 RRM1_SRSF5 5..74 CDD:410008 32/76 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..105 8/49 (16%)
RRM2_SRSF5 99..179 CDD:410158 5/79 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..272 43/116 (37%)

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