DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and SRSF4

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_005617.2 Gene:SRSF4 / 6429 HGNCID:10786 Length:494 Species:Homo sapiens


Alignment Length:379 Identity:105/379 - (27%)
Similarity:136/379 - (35%) Gaps:140/379 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRR 73
            :||:|.|...||:.|:|..|..||.:..|.:..   |:.||||:..|||.|||..|:|:.:||.|
Human     3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKN---GYGFVEFDDLRDADDAVYELNGKDLCGER 64

  Fly    74 ARVELSTGKYARSGGGGGGGGGGGGGGGL--GGRDRGG--------------------------- 109
            ..||     :||.....|..|.|..|.|.  .|||:.|                           
Human    65 VIVE-----HARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYM 124

  Fly   110 ------------GGRGDDKCYE---------------------------------------CGGR 123
                        .||.::...|                                       ...|
Human   125 RQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSRRRRSYSRSR 189

  Fly   124 GHF-----ARHCRERKAR----------QRRRSNSFSRSRSTSRRR------------RTRSKSG 161
            .|.     :||.|:.::|          .|.||.|.|||||.||.|            |:.||..
Human   190 SHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEK 254

  Fly   162 TRSRSRSAG------------------SVGRRSGRSNGRDENGSASRYSDHER----NGSGAVD- 203
            :||||.|||                  :||:...||..|.::.|.||....||    ...|:|. 
Human   255 SRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSR 319

  Fly   204 SPPPPKRRYEDEDDDRVRGSPRSRSRSRSASPAVRRGSPPRRRGDSSASRSVSR 257
            .....|...:.....|.:|..||||||||.|...|:|.  :|..:.|.|||.||
Human   320 GRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGR--KRSREESRSRSRSR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 30/71 (42%)
SRSF4NP_005617.2 RRM1_SRSF4 1..87 CDD:410007 36/91 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..95 7/22 (32%)
RRM2_SRSF4_like 104..175 CDD:410012 3/70 (4%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..494 61/205 (30%)

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