DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and srsf10

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_001011096.1 Gene:srsf10 / 496509 XenbaseID:XB-GENE-492982 Length:258 Species:Xenopus tropicalis


Alignment Length:284 Identity:84/284 - (29%)
Similarity:120/284 - (42%) Gaps:85/284 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRH--PSDRKVYVGDLGNNARKNDLEYVFGAYGSLRSVWI-----ARNPPGFAFVEFESARDAA 58
            |||:  |.:..::|.::.::.|..||...||.||.:..|::     .|.|.|||:|:||..|||.
 Frog     1 MSRYLRPPNTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAE 65

  Fly    59 DAVRGLDGRTVCGRRARVELSTG-------KYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDK 116
            ||:..||.:.:|||:..::.:.|       ..|:.                 ||...|..|.||.
 Frog    66 DALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKE-----------------GRSTYGSSRYDDD 113

  Fly   117 CYECGGRGHFARHCRERKAR--QRRRSNSFS--------------------RSRSTS------RR 153
                       ||.|..::|  :||||.|.|                    ||||.|      |.
 Frog   114 -----------RHNRRSRSRSYERRRSRSRSFEQNYGRSYSPRGRGGERLHRSRSRSDHGRFNRH 167

  Fly   154 RRTRSKSGTRSRSRSAGSVGR-----RSG---RSNGRDENGSASRYSDHERNGSGAVDSPPPPKR 210
            .|:||:||:.|||||.....:     |||   .|.|..:..|.||..::.|....:       :|
 Frog   168 NRSRSRSGSNSRSRSKSEPKKTVREQRSGSRSHSRGHSKADSKSRCRENSRYNRES-------RR 225

  Fly   211 RYEDEDDDRVRGSPRSRSRSRSAS 234
            ...::.....|...||||:|||.|
 Frog   226 DEHEQSKSPSRSVSRSRSKSRSRS 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 27/76 (36%)
srsf10NP_001011096.1 RRM_SRSF10 5..99 CDD:409975 29/93 (31%)

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