DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and RBMXL1

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_062556.2 Gene:RBMXL1 / 494115 HGNCID:25073 Length:390 Species:Homo sapiens


Alignment Length:370 Identity:103/370 - (27%)
Similarity:133/370 - (35%) Gaps:119/370 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SDR--KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARN-----PPGFAFVEFESARDAADAVRG 63
            :||  |:::|.|.....:..||.|||.||.:..|.:.::     ..|||||.|||..||.||.|.
Human     4 ADRPGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68

  Fly    64 LDGRTVCGRRARVELST------GKYA-----RSGG--GGGGGGGGGGGGGLGGRDRGG------ 109
            ::|:::.|:..:||.:|      |::.     ||.|  .|.|.|.||.||..|...|||      
Human    69 MNGKSLDGKAIKVEQATKPSFERGRHGPPPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGG 133

  Fly   110 ------------------------GGRGDDKCYECG----------------GRGHFARHCRERK 134
                                    ||....:....|                ||..:....|...
Human   134 YSMNFNMSSSRGPLPVKRGPPPRSGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREP 198

  Fly   135 ARQRR------RSNSFSRSRSTSRRRRTRSKSGTRS-----RSRSAGSVGRRSGR----SNG--- 181
            ...||      |.:.:|...|.|.|....|:. ||.     |..:....|..|.|    |.|   
Human   199 LPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRD-TRDYAPPPRDYTYRDYGHSSSRDDYPSRGYGD 262

  Fly   182 RDENGSASRYSDHERNGS---------GAVDSP----PPP----KRRYEDEDDDR--VRGSPRSR 227
            ||..|....||||...||         .:..:|    |||    ..||:|....|  ..||..|.
Human   263 RDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPLTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSY 327

  Fly   228 SRSRS---------------ASPAVRRGSPPRRRGDSSASRSVSR 257
            |.|||               ..|:|.||.|..|...||:||...|
Human   328 SSSRSDLYSSCDRVGRQERGLPPSVERGYPSSRDSYSSSSRGAPR 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 29/82 (35%)
RBMXL1NP_062556.2 RRM_RBMX_like 7..86 CDD:409816 28/78 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..390 81/312 (26%)
dnaA 165..>306 CDD:455861 33/141 (23%)
RBM1CTR 173..217 CDD:400429 7/43 (16%)

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