DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and dazap1

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_012815264.1 Gene:dazap1 / 448406 XenbaseID:XB-GENE-856469 Length:411 Species:Xenopus tropicalis


Alignment Length:139 Identity:29/139 - (20%)
Similarity:53/139 - (38%) Gaps:24/139 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWI-----ARNPPGFAFVEFESARDAADAVRGLDGRT 68
            |::||.:.:|..:.:|...|..:|.:..|.:     .:.|.||.|:.||..:....|| .:....
 Frog   115 KIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-NMHFHD 178

  Fly    69 VCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGR------------------GDD 115
            :.|::..|:.:..:.::|...|..|....||..:.....|..|:                  |..
 Frog   179 IMGKKVEVKRAEPRDSKSQTPGPPGSNQWGGRAMQSTANGWTGQPPPTWQQSYSPQGMWMPTGQT 243

  Fly   116 KCYECGGRG 124
            ..:..||.|
 Frog   244 IVFSTGGYG 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 18/76 (24%)
dazap1XP_012815264.1 RRM1_DAZAP1 11..92 CDD:409988
RRM2_DAZAP1 112..191 CDD:409765 18/76 (24%)
Blue background indicates that the domain is not in the aligned region.

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