Sequence 1: | NP_723226.1 | Gene: | x16 / 33967 | FlyBaseID: | FBgn0028554 | Length: | 258 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_989204.1 | Gene: | rbm4b / 394812 | XenbaseID: | XB-GENE-494431 | Length: | 338 | Species: | Xenopus tropicalis |
Alignment Length: | 267 | Identity: | 66/267 - (24%) |
---|---|---|---|
Similarity: | 105/267 - (39%) | Gaps: | 58/267 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRR 73
Fly 74 ARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFARHC-RERKARQ 137
Fly 138 RRRS---------NSFSRSRSTSRRRRT----RSKSGTRSRSRSAGSVGRRSGRSNGRDE----- 184
Fly 185 ----NGSASRYSDHERNGSGAVDS---PPPPKRRYEDEDDDRVRGSPRSRSRSRSASPAV----R 238
Fly 239 RGSPPRR 245 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
x16 | NP_723226.1 | RRM | <1..>82 | CDD:223796 | 23/72 (32%) |
RRM_SRSF3_like | 9..81 | CDD:240819 | 22/71 (31%) | ||
rbm4b | NP_989204.1 | RRM_SF | 2..68 | CDD:388407 | |
RRM_SF | 78..144 | CDD:388407 | 19/67 (28%) | ||
ZnF_C2HC | 161..176 | CDD:197667 | 7/23 (30%) | ||
COG5222 | <162..>201 | CDD:227547 | 7/38 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |