Protein Alignment x16 and tra2

DIOPT Version :10

• Sequence 1: NP_723226.1
• Gene: x16 / 33967
• FlyBaseID: FBgn0028554
• Length: 258
• Species: Drosophila melanogaster
• Sequence 2: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Alignment Length: 177
• Identity: 51/177 - (28%)
• Similarity: 74/177 - (41%)
• Gaps: 28/177 - (15%)

  Fly     4 HP-SDRKVYVGDLGNNARKNDLEYVFGAYGSLRSVWI-----ARNPPGFAFVEFESARDAADAVR 62
            || :.|.:.|..|..|..::.:..:|..||.:..:.:     .:...||.|:.||...||..|..
  Fly    92 HPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKD 156

  Fly    63 GLDGRTVCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFA 127
            ...|..|.|||.||:.|..:.|.:         ...|..||.:.||...|....     .||...
  Fly   157 SCSGIEVDGRRIRVDFSITQRAHT---------PTPGVYLGRQPRGKAPRSFSP-----RRGRRV 207

  Fly   128 RHCRER------KARQRRRSNSFSRS--RSTSRRRRTRSKSGTRSRS 166
            .|.|..      :.|...|::.:.|:  ||.||.|.||::|.:||||
  Fly   208 YHDRSASPYDNYRDRYDYRNDRYDRNLRRSPSRNRYTRNRSYSRSRS 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
x16	NP_723226.1	RRM_SRSF3_like	9..81	CDD:409808	22/76 (29%)
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	23/78 (29%)