DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and hrb1

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_594207.3 Gene:hrb1 / 2542567 PomBaseID:SPAC328.05 Length:464 Species:Schizosaccharomyces pombe


Alignment Length:97 Identity:25/97 - (25%)
Similarity:42/97 - (43%) Gaps:4/97 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DRKVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGF----AFVEFESARDAADAVRGLDGR 67
            :|:||||:|....|..:|:...|..|::.:..|...|.|.    |.:|:.:|.:|..|::.|..:
pombe    76 ERRVYVGNLSYQVRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEARTAIKTLSNQ 140

  Fly    68 TVCGRRARVELSTGKYARSGGGGGGGGGGGGG 99
            ...||...:.....:.||.|...........|
pombe   141 KFMGRLVYIREDREQNARFGSSSVSPSASSNG 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 20/75 (27%)
hrb1NP_594207.3 PABP-1234 62..>385 CDD:130689 25/97 (26%)

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