Protein Alignment x16 and srp1

DIOPT Version :9

• Sequence 1: NP_723226.1
• Gene: x16 / 33967
• FlyBaseID: FBgn0028554
• Length: 258
• Species: Drosophila melanogaster
• Sequence 2: NP_596398.1
• Gene: srp1 / 2539818
• PomBaseID: SPBC11C11.08
• Length: 275
• Species: Schizosaccharomyces pombe
• Alignment Length: 283
• Identity: 77/283 - (27%)
• Similarity: 103/283 - (36%)
• Gaps: 63/283 - (22%)

  Fly     1 MSRHPSDRKVYVGDLGNNARKNDLEYVFGAYGSLRSVWI----ARNPPGFAFVEFESARDAADAV 61
            |||. |.|.:||....:..|..:|.|.|..:|.|....|    .|....|||||:|.:|||.||.
pombe     1 MSRR-SLRTLYVTGFRDGMRARELAYEFEPFGPLIRCDIPIPRTRTSRPFAFVEYEDSRDAEDAY 64

  Fly    62 RGLDGRTVCGRRARVELSTG----KYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGG 122
            ..:.||       |:|...|    ::|:.....|.|...||....|||..|..||       ...
pombe    65 YEVHGR-------RLERGGGVLRVEWAKQPPPSGPGSKRGGRRERGGRVHGDSGR-------LRS 115

  Fly   123 RGHFARHCRERKARQRRRSNSFSRSRSTSRRRRTRSKSGTRSRSRSAGSVGRRSGRSNGRD---- 183
            |.......|.|......||:  .||.|...|.|:||..|   ||||. ...|||.:.|.|.
pombe   116 RSPSPHEARSRSPYNDERSD--RRSMSPRYRSRSRSPDG---RSRSP-DYDRRSPKRNHRSPSPV 174

  Fly   184 -----------------ENGSASRYSDHER-------------NGSGAVDSPPPPKRRYEDEDDD 218
                             :||.......:|:             ||:..|::..|..:....::..
pombe   175 SFAPQKSPVENETETNVDNGDTKISESNEKSGTEVEQQSAPNSNGNEEVNNLEPVGQNESKQEPP 239

  Fly   219 RVRGSPRSRSRSRSASPAVRRGS 241
            :...|..|:.:...|.|.|...|
pombe   240 KEENSNVSQEQPEQAQPEVSAAS 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
x16	NP_723226.1	RRM	<1..>82	CDD:223796	31/88 (35%)
		RRM_SRSF3_like	9..81	CDD:240819	25/75 (33%)
srp1	NP_596398.1	RRM_Srp1p_like	8..85	CDD:240913	26/83 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000