Protein Alignment x16 and rsp-1

DIOPT Version :10

• Sequence 1: NP_723226.1
• Gene: x16 / 33967
• FlyBaseID: FBgn0028554
• Length: 258
• Species: Drosophila melanogaster
• Sequence 2: NP_496442.1
• Gene: rsp-1 / 174748
• WormBaseID: WBGene00004698
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 315
• Identity: 101/315 - (32%)
• Similarity: 136/315 - (43%)
• Gaps: 102/315 - (32%)

  Fly     9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRR 73
            ::|:|.|.:...:.|:|:.|..||.:|.| :.:|  ||.||||:..|||.|||..|:|:.:.|.|
 Worm     4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV-LLKN--GFGFVEFDDKRDAEDAVHDLNGKELGGER 65

  Fly    74 ARVELSTGKYARSGGGGGGGGGGGGGGGLGGR---DRGGGGRGDDKC--YECG--------GRGH 125
            ..::     |::..||||..||.||||..|.|   ..||||.|.|:.  |:.|        ||.:
 Worm    66 VILD-----YSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESRYGRPY 125

  Fly   126 FARH---------------------------------------------------CRER------ 133
            ..||                                                   |.|:
 Worm   126 STRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRCIEKCDGMDL 190

  Fly   134 ------------KARQRRRSNSFSRSRSTSR-RRRTRSKSGTRSRSRSAGSVGRRSGRSNGRDEN 185
                        ..|.|.||||.|||||.|| |||:||:|.:||:|||.....|....|..:..:
 Worm   191 NGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSPPKRSRRESKSKSRS 255

  Fly   186 GSASRYSDHERNGSGA-----VDSPPPPKRRYEDEDDDRVRGSPRSRSRSRSASP 235
            .|.||.:|:.::.|.:     ||..|.|.|......:   :||||   |||||||
 Worm   256 RSRSRSADNRKSRSPSRSPKKVDRSPSPPRGSRSPSE---KGSPR---RSRSASP 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
x16	NP_723226.1	RRM_SRSF3_like	9..81	CDD:409808	27/71 (38%)
rsp-1	NP_496442.1	RRM1_SRSF4_like	4..73	CDD:409774	28/76 (37%)
		RRM2_SRSF1_4_like	129..198	CDD:409776	3/68 (4%)