DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and SF2

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_061518009.1 Gene:SF2 / 1275237 VectorBaseID:AGAMI1_006683 Length:234 Species:Anopheles gambiae


Alignment Length:284 Identity:85/284 - (29%)
Similarity:110/284 - (38%) Gaps:80/284 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRHPSDRKVYVGDLGNNARKNDLEYVFGAYGSLRSVWI--ARNPPGFAFVEFESARDAADAVRG 63
            ||...::.::|||:|..:.|..|::.:|..:|.:..|.:  .|.|| |||||||.||||.|||:.
Mosquito     1 MSHGRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRGPP-FAFVEFEDARDADDAVKA 64

  Fly    64 LDGRTVCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFAR 128
            .||....|.|.|||...          |||.|...|...|..||  ..||.|:    ..||..||
Mosquito    65 RDGYDYDGYRLRVEFPR----------GGGPGSYRGSRQGNSDR--NSRGGDR----NNRGPPAR 113

  Fly   129 HCRERKARQRRRSNSFSRSRSTSRRRRTRSKSGTRSRSRSAGSVGRRSGRSNGRDENGSASRYSD 193
            ..:.|.......|:.              |....:...|.||.|                 .::|
Mosquito   114 RSQFRVMVTGLPSSG--------------SWQDLKDHMREAGDV-----------------CFAD 147

  Fly   194 HERNGSGAVDSPPPPKRRYEDE-------DDDRVRG------------------SPRSRSRSRSA 233
            ..::|:|.|:.     .|:||.       ||.|.|.                  |.:...|.||.
Mosquito   148 VYKDGTGVVEF-----LRHEDMKYAIKKLDDSRFRSHEGEVAYIHVREDSGNDDSGKRDYRDRSY 207

  Fly   234 SPAVRRGSPPRRRGDSSASRSVSR 257
            ||..|||||.......|.|||.||
Mosquito   208 SPRRRRGSPTYSPVQRSVSRSRSR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 33/73 (45%)
SF2XP_061518009.1 None

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