DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment x16 and LOC1269848

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:XP_061501486.1 Gene:LOC1269848 / 1269848 VectorBaseID:AGAMI1_013220 Length:379 Species:Anopheles gambiae


Alignment Length:240 Identity:69/240 - (28%)
Similarity:96/240 - (40%) Gaps:93/240 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRR 73
            |||||:||::|.|:::|..||.||.||:||:|||||||||||||..|||.||||.|||...||.|
Mosquito    12 KVYVGNLGSSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDGTRCCGTR 76

  Fly    74 ARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFARHCRERKARQR 138
            .|||:|:|:                            .|.|:               |.|:.|:.
Mosquito    77 IRVEMSSGR----------------------------SRRDE---------------RTRRPRRS 98

  Fly   139 RRSNS--------------------------------------------------FSRSRSTSRR 153
            .|:||                                                  |:.:.:|::.
Mosquito    99 YRANSSMILLLLLLLHDSVFRHRTSSCPNFASSATSVKSTTATTTTTTTTINSTNFTTTITTTKN 163

  Fly   154 RRTRSKSGTRSRSRSAGSVGRRSGRSNGRDENGSASRYSDHERNG 198
            ..|.:.:.|.:.|.:..:....|..|......||.|...|:..:|
Mosquito   164 TTTTTTTTTTTTSTTTSTTNNTSTASKSPGRCGSISSRPDNSFSG 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 48/71 (68%)
LOC1269848XP_061501486.1 None

Return to query results.
Submit another query.