DRSC/TRiP Functional Genomics Resources

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Protein Alignment x16 and Srsf9

DIOPT Version :10

Sequence 1:NP_723226.1 Gene:x16 / 33967 FlyBaseID:FBgn0028554 Length:258 Species:Drosophila melanogaster
Sequence 2:NP_079849.1 Gene:Srsf9 / 108014 MGIID:104896 Length:222 Species:Mus musculus


Alignment Length:206 Identity:64/206 - (31%)
Similarity:89/206 - (43%) Gaps:48/206 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DRKVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPG---FAFVEFESARDAADAVRGLDGRT 68
            |.::|||:|.::.|:.|||.:|..||.:|.:.: :|..|   ||||.||..|||.||:.|.:|..
Mouse    14 DGRIYVGNLPSDVREKDLEDLFYKYGRIREIEL-KNRHGLVPFAFVRFEDPRDAEDAIYGRNGYD 77

  Fly    69 VCGRRARVELSTGKYARSGGGGGGGGGGGGGGG----------LGGRDRGGGGR--------GDD 115
            ....|.|||     :.|:.||.||...|...|.          :.|....|..:        ..|
Mouse    78 YGQCRLRVE-----FPRTYGGRGGWPRGARNGPPTRRSDFRVLVSGLPPSGSWQDLKDHMREAGD 137

  Fly   116 KCY---ECGGRG-----------HFARHCRERKARQRRRSNSFSR---SRSTSRRRRTRSKSGTR 163
            .||   :..|.|           :..|...:.|.|......|:.|   .|||| ...:||:||:|
Mouse   138 VCYADVQKDGMGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPERSTS-YGYSRSRSGSR 201

  Fly   164 SRS---RSAGS 171
            .|.   :|.||
Mouse   202 GRDSPYQSRGS 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
x16NP_723226.1 RRM_SRSF3_like 9..81 CDD:409808 31/74 (42%)
Srsf9NP_079849.1 RRM1_SRSF9 16..87 CDD:241042 31/76 (41%)
RRM2_SRSF9 104..187 CDD:410161 13/82 (16%)
Interaction with SAFB1. /evidence=ECO:0000250 189..201 6/12 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..222 10/24 (42%)

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