DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nop5 and NOP56

DIOPT Version :9

Sequence 1:NP_477412.1 Gene:nop5 / 33966 FlyBaseID:FBgn0026196 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_176007.1 Gene:NOP56 / 842063 AraportID:AT1G56110 Length:522 Species:Arabidopsis thaliana


Alignment Length:548 Identity:216/548 - (39%)
Similarity:313/548 - (57%) Gaps:65/548 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVLYETPAGYAIFKL--LDE--KKLEQVDNLYQEFETPEKANKLLKLKHFEKFNDTTEALAAAT 61
            |:|:||:.:||.:|::  |||  :..|.|.....:.   .:..::::|..|..|....:||....
plant     3 MYVIYESSSGYGLFEVHGLDEIGQNTEAVRTSVSDL---SRFGRVVQLTAFHPFESALDALNQVN 64

  Fly    62 AAVEGKVAKPLKKTLKKLLVDDVQS------SLLVADAKLGTAIKDKLSVQCVCNTGVQELMRCI 120
            |..||.:...|:..| :|.:..|:.      ||.:|:.|||:.|.:...:.|..|..|.||:|.:
plant    65 AVSEGVMTDELRSFL-ELNLPKVKEGKKPKFSLGLAEPKLGSHIFEATKIPCQSNEFVLELLRGV 128

  Fly   121 RQQADSLLGGLPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAR 185
            ||..|..:..|...::....||||||.||.|:||:.:::|.|::||..:||.|||::|::.||.|
plant   129 RQHFDRFIKDLKPGDLEKSQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKDINSFAMRVR 193

  Fly   186 EWYGWHFPELGKIITDNIAFVKTIKLVGTRDNMATSD----LSDIL-PEDVEEKVKEAAEISMGT 245
            |||.||||||.||:.||..:.:..|::..:..: |.|    |:::| .||..::|.||.:.|||:
plant   194 EWYSWHFPELVKIVNDNYLYARVSKMIDDKSKL-TEDHIPMLTEVLGDEDKAKEVIEAGKASMGS 257

  Fly   246 EISEEDVLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLINLA 310
            ::|..|::|:|....:::.:.|||..|||||..:|..:||||..|:|:.||||||:|||||.|||
plant   258 DLSPLDLINVQTFAQKVMDLADYRKKLYDYLVTKMSDIAPNLAALIGEMVGARLISHAGSLTNLA 322

  Fly   311 KHPSSTVQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMSRSLAAKASLATRVDA 375
            |.||||:|||||||||||||||:.:|||||||:|:..:|:||.||||:::|.||.|.|:|:|:|.
plant   323 KCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARYLANKCSIASRIDC 387

  Fly   376 FGEEATFELGAAHKVKLESRLRLLEEG---------------NLRKLSGTGK-------AKAKFE 418
            |.:.||...|...:.::|.||...::|               || |....||       .|:|.:
plant   388 FADGATTAFGEKLREQVEERLEFYDKGVAPRKNVDVMKEVIENL-KQEEEGKEPVDASVKKSKKK 451

  Fly   419 KYQAKSEVFTYQPEADNTLNVKKKRKHSESEQQTPVKKEEPAEEEAEVKSEKKKKKKKKQKDEEV 483
            |.:.:.|......|.|.:...|||.|          :|.|.|||..  ||||||.||.|...|| 
plant   452 KAKGEEEEEVVAMEEDKSEKKKKKEK----------RKMETAEENE--KSEKKKTKKSKAGGEE- 503

  Fly   484 EAVEEAAAPEPEDQPTPAKKKKKSKHQE 511
                     |.:|..:..|||||||..|
plant   504 ---------ETDDGHSTKKKKKKSKSAE 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nop5NP_477412.1 NOP5NT 2..>52 CDD:285382 14/53 (26%)
NOSIC 163..214 CDD:197999 25/50 (50%)
Nop 169..397 CDD:280047 117/232 (50%)
NOP56NP_176007.1 NOP5NT 4..69 CDD:400464 17/67 (25%)
SIK1 46..414 CDD:224415 162/369 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1498
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D632707at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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