DRSC/TRiP Functional Genomics Resources

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Protein Alignment nop5 and nop56

DIOPT Version :9

Sequence 1:NP_477412.1 Gene:nop5 / 33966 FlyBaseID:FBgn0026196 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001184132.1 Gene:nop56 / 733535 XenbaseID:XB-GENE-5879910 Length:536 Species:Xenopus tropicalis


Alignment Length:546 Identity:217/546 - (39%)
Similarity:320/546 - (58%) Gaps:52/546 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFE----TPEKANKLLKLKHFEKFNDTTEALAAAT 61
            :.||:|..||||:|.:   |::|::..|..:.|    ...|.|.::||..|..|.....||....
 Frog     4 LHVLFEHAAGYALFVV---KEVEEIGLLIPQVEESLLNVGKFNNIVKLAAFSPFKSAQSALENVN 65

  Fly    62 AAVEGKVAKPLKKTLKKLLVDDVQSSLL-VADAKLGTAIKDKLSVQCVCNTGVQELMRCIRQQAD 125
            |..||.:.:.||..|:..:....:.:|| |.|||:|.||:::|.:.|.....|.|::|.||....
 Frog    66 AISEGVLHEDLKLLLETNMPAKKKKALLGVGDAKIGAAIQEELKIPCQTGGAVAEILRGIRLHFH 130

  Fly   126 SLLGGLPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGW 190
            ||:.||..:..:...|||.||.||.|:||:.:::|.||:|:..|||.|||::|.:.||.|||||:
 Frog   131 SLVKGLTAQSASKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGY 195

  Fly   191 HFPELGKIITDNIAFVKTIKLVGTRDNMA---TSDLSDILPEDVE-EKVKEAAEISMGTEISEED 251
            |||||.||::||..:.:..|.:|.|..::   ..::.:||.:..: :.|.:|:..|||.:||..|
 Frog   196 HFPELIKIVSDNYTYCRMAKYIGNRKELSEEKLEEMEEILMDSAKAQAVLDASRSSMGMDISPID 260

  Fly   252 VLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLINLAKHPSST 316
            ::||:.....:||:::||..|.:||:::|..:||:|:.|:|:.||||||:|||||.||||:|:||
 Frog   261 LINIESFSSRVISLSEYRKELQEYLRSKMSQVAPSLSALIGEVVGARLISHAGSLTNLAKYPAST 325

  Fly   317 VQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMSRSLAAKASLATRVDAFGEEAT 381
            ||||||||||||||||:.:|||||||:|:..:|:|:.||||::||.||.|.::|:|:|.|.|..|
 Frog   326 VQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCTIASRIDCFSEIPT 390

  Fly   382 FELGAAHKVKLESRLRLLEEG-----NL------------------RKLSGTGKAKAKFEKYQAK 423
            ...|...:.::|.||...|.|     ||                  |||....|.:.|.||.|.:
 Frog   391 SVFGDKLREQVEERLAFYETGEAPRKNLDVMKEAQQEATEVVTEIKRKLDKKEKKRKKREKRQLE 455

  Fly   424 SEVFTYQPEADNTLNVKKKRKHSESEQQTPVKKEEPAEEEAEVK----SEKKKKKKKKQKDEEVE 484
            :.....:.|.:.....||.|::.|.|:: |.||::....|.||.    .|:...||||||     
 Frog   456 ALAVAQEAEEEEEPTQKKSRENGEEEEE-PKKKKKKRHAEPEVSENGMEEETPSKKKKQK----- 514

  Fly   485 AVEEAAAPEPEDQPTPAKKKKKSKHQ 510
                |||   |:.|...|||||||.:
 Frog   515 ----AAA---EEAPQKPKKKKKSKEE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nop5NP_477412.1 NOP5NT 2..>52 CDD:285382 18/53 (34%)
NOSIC 163..214 CDD:197999 26/50 (52%)
Nop 169..397 CDD:280047 113/231 (49%)
nop56NP_001184132.1 NOP5NT 5..70 CDD:285382 21/67 (31%)
SIK1 47..413 CDD:224415 162/365 (44%)
NOSIC 168..219 CDD:197999 26/50 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D261881at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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