DRSC/TRiP Functional Genomics Resources

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Protein Alignment nop5 and nop56

DIOPT Version :10

Sequence 1:NP_477412.1 Gene:nop5 / 33966 FlyBaseID:FBgn0026196 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001184132.1 Gene:nop56 / 733535 XenbaseID:XB-GENE-5879910 Length:536 Species:Xenopus tropicalis


Alignment Length:546 Identity:217/546 - (39%)
Similarity:320/546 - (58%) Gaps:52/546 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFE----TPEKANKLLKLKHFEKFNDTTEALAAAT 61
            :.||:|..||||:|.:   |::|::..|..:.|    ...|.|.::||..|..|.....||....
 Frog     4 LHVLFEHAAGYALFVV---KEVEEIGLLIPQVEESLLNVGKFNNIVKLAAFSPFKSAQSALENVN 65

  Fly    62 AAVEGKVAKPLKKTLKKLLVDDVQSSLL-VADAKLGTAIKDKLSVQCVCNTGVQELMRCIRQQAD 125
            |..||.:.:.||..|:..:....:.:|| |.|||:|.||:::|.:.|.....|.|::|.||....
 Frog    66 AISEGVLHEDLKLLLETNMPAKKKKALLGVGDAKIGAAIQEELKIPCQTGGAVAEILRGIRLHFH 130

  Fly   126 SLLGGLPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGW 190
            ||:.||..:..:...|||.||.||.|:||:.:::|.||:|:..|||.|||::|.:.||.|||||:
 Frog   131 SLVKGLTAQSASKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGY 195

  Fly   191 HFPELGKIITDNIAFVKTIKLVGTRDNMA---TSDLSDILPEDVE-EKVKEAAEISMGTEISEED 251
            |||||.||::||..:.:..|.:|.|..::   ..::.:||.:..: :.|.:|:..|||.:||..|
 Frog   196 HFPELIKIVSDNYTYCRMAKYIGNRKELSEEKLEEMEEILMDSAKAQAVLDASRSSMGMDISPID 260

  Fly   252 VLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLINLAKHPSST 316
            ::||:.....:||:::||..|.:||:::|..:||:|:.|:|:.||||||:|||||.||||:|:||
 Frog   261 LINIESFSSRVISLSEYRKELQEYLRSKMSQVAPSLSALIGEVVGARLISHAGSLTNLAKYPAST 325

  Fly   317 VQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMSRSLAAKASLATRVDAFGEEAT 381
            ||||||||||||||||:.:|||||||:|:..:|:|:.||||::||.||.|.::|:|:|.|.|..|
 Frog   326 VQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCTIASRIDCFSEIPT 390

  Fly   382 FELGAAHKVKLESRLRLLEEG-----NL------------------RKLSGTGKAKAKFEKYQAK 423
            ...|...:.::|.||...|.|     ||                  |||....|.:.|.||.|.:
 Frog   391 SVFGDKLREQVEERLAFYETGEAPRKNLDVMKEAQQEATEVVTEIKRKLDKKEKKRKKREKRQLE 455

  Fly   424 SEVFTYQPEADNTLNVKKKRKHSESEQQTPVKKEEPAEEEAEVK----SEKKKKKKKKQKDEEVE 484
            :.....:.|.:.....||.|::.|.|:: |.||::....|.||.    .|:...||||||     
 Frog   456 ALAVAQEAEEEEEPTQKKSRENGEEEEE-PKKKKKKRHAEPEVSENGMEEETPSKKKKQK----- 514

  Fly   485 AVEEAAAPEPEDQPTPAKKKKKSKHQ 510
                |||   |:.|...|||||||.:
 Frog   515 ----AAA---EEAPQKPKKKKKSKEE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nop5NP_477412.1 NOP5NT 2..>52 CDD:462382 18/53 (34%)
Nop 170..397 CDD:460335 112/230 (49%)
nop56NP_001184132.1 NOP5NT 5..70 CDD:462382 21/67 (31%)
Nop 175..405 CDD:460335 111/229 (48%)

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