DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nop5 and Nop58

DIOPT Version :10

Sequence 1:NP_477412.1 Gene:nop5 / 33966 FlyBaseID:FBgn0026196 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_063123733.1 Gene:Nop58 / 60373 RGDID:620484 Length:544 Species:Rattus norvegicus


Alignment Length:509 Identity:321/509 - (63%)
Similarity:395/509 - (77%) Gaps:13/509 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFETPEKANKLLKLKHFEKFNDTTEALAAATAAVE 65
            |.||:||..||||||:|:||||::||:|::||||||||||::||||||||.||.|||||.||.:|
  Rat     1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAFTALME 65

  Fly    66 GKVAKPLKKTLKKLLVDDVQSSLLVADAKLGTAIKDKLSVQCVCNTGVQELMRCIRQQADSLLGG 130
            ||:.|.|||.||| :|.:....|.|||||||..||:||::.|:.:..|.||||.||.|.|.|:.|
  Rat    66 GKINKQLKKVLKK-IVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPG 129

  Fly   131 LPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRAREWYGWHFPEL 195
            :..|||.||.||||||||||:||||.||:|||||||..||||||||||||:||.|||||||||||
  Rat   130 VEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPEL 194

  Fly   196 GKIITDNIAFVKTIKLVGTRDNMATSDLSDILPEDVEEKVKEAAEISMGTEISEEDVLNIQCLCD 260
            ||||:||:.:.|.::.||.|.|.|::.||:.|.|:||.:||.|||||||||:||||:.||..||.
  Rat   195 GKIISDNLTYCKCLQKVGDRKNYASATLSEFLSEEVEAEVKAAAEISMGTEVSEEDICNILHLCT 259

  Fly   261 EIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLINLAKHPSSTVQILGAEKA 325
            ::|.|::|||.||:||:.||||:|||:||:||:.||||||||||||:|||||.:|||||||||||
  Rat   260 QVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKA 324

  Fly   326 LFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMSRSLAAKASLATRVDAFGEEATFELGAAHKV 390
            ||||||:::|||||||||||.||||.|.|:|||:||.||||..||.|.|||||:::..:||.::.
  Rat   325 LFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGAENRA 389

  Fly   391 KLESRLRLLEEGNLRKLSGTGKAKAKFEKYQAKSEVFTYQPEADNTL-NVKKKRKHSESEQQTPV 454
            |||:|||:||:..:||:||||||.||.|||:.||||.||.|..|:|| ...||||..|      |
  Rat   390 KLEARLRILEDRGIRKISGTGKALAKAEKYEHKSEVKTYDPSGDSTLPTCSKKRKIEE------V 448

  Fly   455 KKEEPAEEEAEVKSEKKKKKKKKQKDEEVEAVEEAAAPEPEDQPTPAKKKKKSK 508
            .||   :|..|.|::|.|.|.|.:.:||:|..||...  .|::||..|||||.|
  Rat   449 DKE---DEITEKKAKKAKIKIKAEVEEEMEEAEEEQV--VEEEPTVKKKKKKDK 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nop5NP_477412.1 NOP5NT 2..>52 CDD:462382 36/49 (73%)
Nop 170..397 CDD:460335 155/226 (69%)
Nop58XP_063123733.1 None

Return to query results.
Submit another query.