DRSC/TRiP Functional Genomics Resources

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Protein Alignment nop5 and Nop56

DIOPT Version :9

Sequence 1:NP_477412.1 Gene:nop5 / 33966 FlyBaseID:FBgn0026196 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_651040.3 Gene:Nop56 / 42633 FlyBaseID:FBgn0038964 Length:496 Species:Drosophila melanogaster


Alignment Length:540 Identity:213/540 - (39%)
Similarity:296/540 - (54%) Gaps:80/540 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFVLYETPAGYAIFKLLDEKKLEQVDNLYQEFETP----EKANKLLKLKHFEKFNDTTEALAAAT 61
            ::||||..||:::|.:   |:.|:|.....:.|:.    .|.|.::||..|..|.....||....
  Fly     4 LYVLYEHAAGFSLFSV---KEFEEVSMFLPQVESSVTDLAKFNSIVKLAGFAPFKTAIAALENIN 65

  Fly    62 AAVEGKVAKPLKKTLKKLLVDDV-------QSSLLVADAKLGTAIKDKLSVQCVCNTGVQELMRC 119
            |..||.|.:.|...|     ||.       :.:|.:||||||.||.:.:.|||.....|.|::|.
  Fly    66 AISEGIVPQDLLSFL-----DDFFAKLKKKKCTLGIADAKLGAAITEAIGVQCSHFGVVPEILRG 125

  Fly   120 IRQQADSLLGGLPKREMTAMALGLAHSLSRYKLKFSPDKIDTMIVQAQCLLDDLDKELNNYMMRA 184
            :|.....|:.|...:......|||.||.||.|:||:..:.|.||:|:..|||.|||::|.:.||.
  Fly   126 VRFHFAKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRI 190

  Fly   185 REWYGWHFPELGKIITDNIAFVKTIKLVGTRDNMATSDLSD----ILPEDVEEKVKEAAEISMGT 245
            ||||.:|||||.||:.||..|.|..|.:..|.|:....|.|    ::.....:.:.:||::|||.
  Fly   191 REWYSYHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIDAAKMSMGM 255

  Fly   246 EISEEDVLNIQCLCDEIISINDYRTHLYDYLKARMMAMAPNLTVLVGDTVGARLIAHAGSLINLA 310
            :||..|::||:...:.::.:::||..|..||..:|..:||||..|:||.||||||:|||||.|||
  Fly   256 DISIVDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLA 320

  Fly   311 KHPSSTVQILGAEKALFRALKTKKDTPKYGLIYHAQLVGQASQKNKGKMSRSLAAKASLATRVDA 375
            |:|:||||||||||||||||||:.:|||||||||:..:|:|..||||::||.||.|.|:|:|:|.
  Fly   321 KYPASTVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDC 385

  Fly   376 FGEEATFELGAAHKVKLESRLRLLEEGNLRKLSGTGKAKAKFEKYQAKSEVFTYQPEADNTLNVK 440
            |.|:.|...|...|.::|.||:..|.|::                                    
  Fly   386 FLEQPTSVFGETLKQQVEDRLKFYESGDV------------------------------------ 414

  Fly   441 KKRKHSESEQQTPVKKE--EPAEEEA--EVKSEKKKKKKKKQKDEEVE---------AVEEAAAP 492
             .||:.|      |.||  |.|.:||  .|:|||||||||:..::|.|         |..||...
  Fly   415 -PRKNIE------VMKEAIEAAGQEAAITVQSEKKKKKKKRAAEDEGETNGASNGNGAAAEAENG 472

  Fly   493 EPEDQPTP-AKKKKKSKHQE 511
            ...|...| .|||||:|::|
  Fly   473 NGNDDGEPKKKKKKKNKNKE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nop5NP_477412.1 NOP5NT 2..>52 CDD:285382 17/53 (32%)
NOSIC 163..214 CDD:197999 27/50 (54%)
Nop 169..397 CDD:280047 117/231 (51%)
Nop56NP_651040.3 NOP5NT 5..70 CDD:285382 20/67 (30%)
SIK1 47..430 CDD:224415 173/430 (40%)
NOSIC 169..220 CDD:197999 27/50 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1498
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D261881at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10894
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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